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["EX_uaagmda(e)"]}, "metabolites": {"uaagmda_e": -1.0}, "id": "EX_uaagmda_e", "gene_reaction_rule": ""}, {"name": "Undecaprenyl diphosphate exchange", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["EX_udcpdp(e)"]}, "metabolites": {"udcpdp_e": -1.0}, "id": "EX_udcpdp_e", "gene_reaction_rule": ""}, {"name": "Undecaprenyl phosphate exchange", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["EX_udcpp(e)"]}, "metabolites": {"udcpp_e": -1.0}, "id": "EX_udcpp_e", "gene_reaction_rule": ""}, {"name": "Uracil exchange", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["EX_ura(e)"]}, "metabolites": {"ura_e": -1.0}, "id": "EX_ura_e", "gene_reaction_rule": ""}, {"name": "L-Valine exchange", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["EX_val-L(e)"]}, "metabolites": {"val__L_e": -1.0}, "id": "EX_val__L_e", "gene_reaction_rule": ""}, {"name": "Xanthine exchange", "upper_bound": 1000.0, 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["3OAS160"]}, "metabolites": {"ACP_c": 1.0, "malACP_c": -1.0, "h_c": -1.0, "myrsACP_c": -1.0, "3opalmACP_c": 1.0, "co2_c": 1.0}, "id": "3OAS160", "gene_reaction_rule": "CLJU_RS20760"}, {"subsystem": "Fatty Acid  Biosynthesis", "name": "3-oxoacyl-[acyl-carrier-protein] synthase (n-C16:1)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["3OAS161"]}, "metabolites": {"tdeACP_c": -1.0, "ACP_c": 1.0, "malACP_c": -1.0, "3ocpalm9eACP_c": 1.0, "h_c": -1.0, "co2_c": 1.0}, "id": "3OAS161", "gene_reaction_rule": "CLJU_RS20760"}, {"subsystem": "Fatty Acid  Biosynthesis", "name": "3-oxoacyl-[acyl-carrier-protein] synthase (n-C18:0)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["3OAS180"]}, "metabolites": {"3ooctdACP_c": 1.0, "ACP_c": 1.0, "malACP_c": -1.0, "h_c": -1.0, "palmACP_c": -1.0, "co2_c": 1.0}, "id": "3OAS180", "gene_reaction_rule": "CLJU_RS20760"}, {"subsystem": "Fatty Acid  Biosynthesis", "name": "3-oxoacyl-[acyl-carrier-protein] 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{"name": "4-Hydroxy-L-threonine synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["4HTHRS"]}, "metabolites": {"h2o_c": -1.0, "phthr_c": -1.0, "pi_c": 1.0, "4hthr_c": 1.0}, "id": "4HTHRS", "gene_reaction_rule": "CLJU_RS19875 or CLJU_RS16355"}, {"subsystem": "Vitamins & Cofactor Biosynthesis", "name": "5-hydroxybenzimidazole methyltransferase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["5HBZIDMT"]}, "metabolites": {"dmbzid_c": 1.0, "h2o_c": 1.0, "nadp_c": 1.0, "nadph_c": -1.0, "h_c": 1.0, "amet_c": -2.0, "ahcys_c": 2.0, "5hbzid_c": -1.0}, "id": "5HBZIDMT", "gene_reaction_rule": ""}, {"subsystem": "Vitamins & Cofactor Biosynthesis", "name": "5-hydroxybenzimidazole synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["5HBZIDS2"]}, "metabolites": {"nh4_c": 1.0, "pi_c": 1.0, "for_c": 1.0, "5hbzid_c": 1.0, "air_c": -1.0}, "id": "5HBZIDS2", "gene_reaction_rule": ""}, {"subsystem": "Pentose and Glucuronate Interconversions", "name": "Alpha-N-arabinofuranosidase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ABFA"]}, "metabolites": {"arab__L_e": 3.0, "h2o_e": -2.0, "araban__L_e": -1.0}, "id": "ABFA", "gene_reaction_rule": "CLJU_RS00605"}, {"subsystem": "Alanine, aspartate and glutamate metabolism", "name": "4-aminobutyrate transaminase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ABTA"]}, "metabolites": {"akg_c": -1.0, "glu__L_c": 1.0, "sucsal_c": 1.0, "4abut_c": -1.0}, "id": "ABTA", "gene_reaction_rule": "CLJU_RS10045"}, {"subsystem": "Arginine and Proline Metabolism", "name": "Aminobutyraldehyde dehydrogenase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ABUTD"]}, "metabolites": {"h2o_c": -1.0, "4abutn_c": -1.0, "4abut_c": 1.0, "h_c": 2.0, "nad_c": -1.0, "nadh_c": 1.0}, "id": "ABUTD", "gene_reaction_rule": ""}, {"subsystem": "SOB reactions", "name": "Acetyl-CoA C-acetyltransferase", "upper_bound": 0.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ACACT1r"]}, "metabolites": {"aacoa_c": 1.0, "coa_c": 1.0, "accoa_c": -2.0}, "id": "ACACT1r", "gene_reaction_rule": ""}, {"subsystem": "Central Metabolism", "name": "Acetaldehyde dehydrogenase (acetylating)", "upper_bound": 0.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["ACALD"]}, "metabolites": {"accoa_c": 1.0, "acald_c": -1.0, "coa_c": -1.0, "h_c": 1.0, "nad_c": -1.0, "nadh_c": 1.0}, "id": "ACALD", "gene_reaction_rule": "CLJU_RS08095 or CLJU_RS08100 or CLJU_RS05870"}, {"subsystem": "Vitamins & Cofactor Biosynthesis", "name": "Adenosyl cobinamide phosphate guanyltransferase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ACBIPGT"]}, "metabolites": {"adocbip_c": -1.0, "ppi_c": 1.0, "gtp_c": -1.0, "h_c": -1.0, "agdpcbi_c": 1.0}, "id": "ACBIPGT", "gene_reaction_rule": "CLJU_RS17490"}, {"subsystem": "Fatty Acid  Biosynthesis", "name": "Acetyl-CoA carboxylase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ACCOAC"]}, "metabolites": {"malcoa_c": 1.0, "adp_c": 1.0, "atp_c": -1.0, "hco3_c": -1.0, "h_c": 1.0, "accoa_c": -1.0, "pi_c": 1.0}, "id": "ACCOAC", "gene_reaction_rule": "CLJU_RS20735 and CLJU_RS20740 and CLJU_RS20745 and CLJU_RS20755"}, {"subsystem": "Arginine and Proline Metabolism", "name": "Acetylglutamate kinase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ACGK"]}, "metabolites": {"acg5p_c": 1.0, "acglu_c": -1.0, "atp_c": -1.0, "adp_c": 1.0}, "id": "ACGK", "gene_reaction_rule": "CLJU_RS10565"}, {"subsystem": "Arginine and Proline Metabolism", "name": "N-acetylglutamate synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ACGS"]}, "metabolites": {"glu__L_c": -1.0, "acglu_c": 1.0, "coa_c": 1.0, "h_c": 1.0, "accoa_c": -1.0}, "id": "ACGS", "gene_reaction_rule": "CLJU_RS10570"}, {"subsystem": "Valine, leucine and isoleucine degradation", "name": "2-aceto-2-hydroxybutanoate synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ACHBS"]}, "metabolites": {"2obut_c": -1.0, "2ahbut_c": 1.0, "pyr_c": -1.0, "co2_c": 1.0, "h_c": -1.0}, "id": "ACHBS", "gene_reaction_rule": "(CLJU_RS10025 and (CLJU_RS10020 or CLJU_RS11515)) or (CLJU_RS19160 and CLJU_RS10025)"}, {"subsystem": "Central Metabolism", "name": "Acetate kinase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["ACKr"]}, "metabolites": {"ac_c": -1.0, "actp_c": 1.0, "adp_c": 1.0, "atp_c": -1.0}, "id": "ACKr", "gene_reaction_rule": "CLJU_RS06265"}, {"name": "Acetolactate decarboxylase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ACLDC"]}, "metabolites": {"co2_c": 1.0, "actn__R_c": 1.0, "alac__S_c": -1.0, "h_c": -1.0}, "id": "ACLDC", "gene_reaction_rule": "CLJU_RS04120"}, {"subsystem": "Valine, leucine and isoleucine biosynthesis", "name": "Acetolactate synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ACLS"]}, "metabolites": {"pyr_c": -2.0, "co2_c": 1.0, "h_c": -1.0, "alac__S_c": 1.0}, "id": "ACLS", "gene_reaction_rule": "(CLJU_RS19160 and (CLJU_RS10025 and CLJU_RS10025)) or (CLJU_RS10020 or CLJU_RS11515)"}, {"subsystem": "SOB reactions", "name": "Acyl-CoA dehydrogenase (butanoyl-CoA), ferredoxin coupled", "upper_bound": 0.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ACOAD1z"]}, "metabolites": {"btcoa_c": 1.0, "b2coa_c": -1.0, "fdxr_4_2_c": 1.0, "nad_c": 2.0, "nadh_c": -2.0, "fdxo_4_2_c": -1.0}, "id": "ACOAD1z", "gene_reaction_rule": "CLJU_RS19410 and (CLJU_RS19400 and CLJU_RS19405)"}, {"subsystem": "Fatty Acid  Biosynthesis", "name": "Acetyl-CoA ACP transacylase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["ACOATA"]}, "metabolites": {"acACP_c": 1.0, "ACP_c": -1.0, "coa_c": 1.0, "accoa_c": -1.0}, "id": "ACOATA", "gene_reaction_rule": "CLJU_RS06285 and CLJU_RS20780"}, {"subsystem": "TCA Cycle", "name": "Aconitase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["ACONT"]}, "metabolites": {"icit_c": 1.0, "cit_c": -1.0}, "id": "ACONT", "gene_reaction_rule": "CLJU_RS03255 or CLJU_RS15025"}, {"subsystem": "TCA Cycle", "name": "Aconitase (half-reaction A, Citrate hydro-lyase)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["ACONTa"]}, "metabolites": {"h2o_c": 1.0, "acon_C_c": 1.0, "cit_c": -1.0}, "id": "ACONTa", "gene_reaction_rule": "CLJU_RS03255 or CLJU_RS15025"}, {"subsystem": "TCA Cycle", "name": "Aconitase (half-reaction B, Isocitrate hydro-lyase)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["ACONTb"]}, "metabolites": {"h2o_c": -1.0, "icit_c": 1.0, "acon_C_c": -1.0}, "id": "ACONTb", "gene_reaction_rule": "CLJU_RS15025 or CLJU_RS03255"}, {"subsystem": "Arginine and Proline Metabolism", "name": "Acetylornithine transaminase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["ACOTA"]}, "metabolites": {"akg_c": -1.0, "glu__L_c": 1.0, "acorn_c": -1.0, "acg5sa_c": 1.0}, "id": "ACOTA", "gene_reaction_rule": "CLJU_RS10560"}, {"subsystem": "Vitamins & Cofactor Biosynthesis", "name": "Acyl-carrier protein synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ACPS1"]}, "metabolites": {"apoACP_c": -1.0, "ACP_c": 1.0, "coa_c": -1.0, "h_c": 1.0, "pap_c": 1.0}, "id": "ACPS1", "gene_reaction_rule": "CLJU_RS01470"}, {"subsystem": "Transport", "name": "Acetate reversible transport via proton symport", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["ACt2r"]}, "metabolites": {"ac_c": 1.0, "h_e": -1.0, "ac_e": -1.0, "h_c": 1.0}, "id": "ACt2r", "gene_reaction_rule": ""}, {"name": "Adenosine deaminase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ADA"]}, "metabolites": {"h_c": -1.0, "h2o_c": -1.0, "adn_c": -1.0, "nh4_c": 1.0, "ins_c": 1.0}, "id": "ADA", "gene_reaction_rule": "CLJU_RS13960"}, {"subsystem": "Folate biosynthesis", "name": "4-aminobenzoate synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ADCL"]}, "metabolites": {"pyr_c": 1.0, "4adcho_c": -1.0, "h_c": 1.0, "4abz_c": 1.0}, "id": "ADCL", "gene_reaction_rule": "CLJU_RS17710"}, {"subsystem": "Vitamins & Cofactor Biosynthesis", "name": "ADCPS1", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ADCPS1"]}, "metabolites": {"atp_c": -1.0, "appl_c": -1.0, "adocbi_c": 1.0, "h_c": 1.0, "adp_c": 1.0, "pi_c": 1.0, "adcobhex_c": -1.0}, "id": "ADCPS1", "gene_reaction_rule": "CLJU_RS15775"}, {"subsystem": "Vitamins & Cofactor Biosynthesis", "name": "ADCPS2", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ADCPS2"]}, "metabolites": {"adocbip_c": 1.0, "applp_c": -1.0, "atp_c": -1.0, "h_c": 1.0, "adp_c": 1.0, "pi_c": 1.0, "adcobhex_c": -1.0}, 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Cofactor Biosynthesis", "name": "Adenosyl cobinamide kinase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ADOCBIK"]}, "metabolites": {"adocbip_c": 1.0, "adocbi_c": -1.0, "h_c": 1.0, "atp_c": -1.0, "adp_c": 1.0}, "id": "ADOCBIK", "gene_reaction_rule": "CLJU_RS17490"}, {"subsystem": "Vitamins & Cofactor Biosynthesis", "name": "Adenosylcobalamin 5'-phosphate synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ADOCBLS"]}, "metabolites": {"adocbl_c": 1.0, "gmp_c": 1.0, "h_c": 1.0, "rdmbzi_c": -1.0, "agdpcbi_c": -1.0}, "id": "ADOCBLS", "gene_reaction_rule": "CLJU_RS17495"}, {"subsystem": "Purine metabolism", "name": "ADPribose diphosphatase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ADPRDP"]}, "metabolites": {"amp_c": 1.0, "h2o_c": -1.0, "r5p_c": 1.0, "adprib_c": -1.0, "h_c": 2.0}, "id": "ADPRDP", "gene_reaction_rule": "CLJU_RS05505"}, {"subsystem": "Nucleotide Metabolism", "name": "Adenine phosphoribosyltransferase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ADPT"]}, "metabolites": {"ppi_c": 1.0, "ade_c": -1.0, "amp_c": 1.0, "prpp_c": -1.0}, "id": "ADPT", "gene_reaction_rule": "CLJU_RS16620"}, {"subsystem": "Purine metabolism", "name": "Adenylsuccinate lyase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ADSL1"]}, "metabolites": {"fum_c": 1.0, "amp_c": 1.0, "dcamp_c": -1.0}, "id": "ADSL1r", "gene_reaction_rule": "CLJU_RS06565"}, {"subsystem": "Purine metabolism", "name": "Adenylosuccinate lyase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ADSL2"]}, "metabolites": {"aicar_c": 1.0, "fum_c": 1.0, "25aics_c": -1.0}, "id": "ADSL2r", "gene_reaction_rule": "CLJU_RS06565"}, {"subsystem": "Purine metabolism", "name": "Adenylosuccinate synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ADSS"]}, "metabolites": {"gdp_c": 1.0, "asp__L_c": -1.0, 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"upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["AGPAT160"]}, "metabolites": {"pa160_c": 1.0, "ACP_c": 1.0, "1hdecg3p_c": -1.0, "palmACP_c": -1.0}, "id": "AGPAT160", "gene_reaction_rule": "CLJU_RS19340 or CLJU_RS03245"}, {"subsystem": "Glycerophospholipid Metabolism", "name": "1-hexadec-7-enoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C16:1)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["AGPAT161"]}, "metabolites": {"pa161_c": 1.0, "1hdec9eg3p_c": -1.0, "ACP_c": 1.0, "hdeACP_c": -1.0}, "id": "AGPAT161", "gene_reaction_rule": "CLJU_RS03245 or CLJU_RS19340"}, {"subsystem": "Glycerophospholipid Metabolism", "name": "1-octadecanoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C18:0)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["AGPAT180"]}, "metabolites": {"ocdcaACP_c": -1.0, "ACP_c": 1.0, "1odecg3p_c": -1.0, "pa180_c": 1.0}, "id": "AGPAT180", "gene_reaction_rule": "CLJU_RS03245 or CLJU_RS19340"}, {"subsystem": "Glycerophospholipid Metabolism", "name": "1-octadec-7-enoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C18:1)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["AGPAT181"]}, "metabolites": {"1odec11eg3p_c": -1.0, "octeACP_c": -1.0, "ACP_c": 1.0, "pa181_c": 1.0}, "id": "AGPAT181", "gene_reaction_rule": "CLJU_RS03245 or CLJU_RS19340"}, {"subsystem": "Arginine and Proline Metabolism", "name": "N-acetyl-g-glutamyl-phosphate reductase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["AGPR"]}, "metabolites": {"nadp_c": -1.0, "nadph_c": 1.0, "acg5p_c": 1.0, "acg5sa_c": -1.0, "h_c": 1.0, "pi_c": -1.0}, "id": "AGPR", "gene_reaction_rule": "CLJU_RS10575"}, {"subsystem": "Cysteine and Methionine Metabolism", "name": "S-adenosylhomocysteine nucleosidase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["AHCYSNS"]}, "metabolites": {"ahcys_c": -1.0, "h2o_c": -1.0, "ade_c": 1.0, "rhcys_c": 1.0}, "id": "AHCYSNS", "gene_reaction_rule": "CLJU_RS05255"}, {"subsystem": "Cysteine and Methionine Metabolism", "name": "O acetylhomoserine  thiol  lyase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["AHSERL2"]}, "metabolites": {"hcys__L_c": 1.0, "ac_c": 1.0, "h_c": 1.0, "h2s_c": -1.0, "achms_c": -1.0}, "id": "AHSERL2", "gene_reaction_rule": "CLJU_RS03265"}, {"subsystem": "Purine metabolism", "name": "Phosphoribosylaminoimidazolecarboxamide formyltransferase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["AICART"]}, "metabolites": {"aicar_c": -1.0, "fprica_c": 1.0, "10fthf_c": -1.0, "thf_c": 1.0}, "id": "AICART", "gene_reaction_rule": "CLJU_RS04230 or CLJU_RS10900"}, {"subsystem": "Purine metabolism", "name": "Phosphoribosylaminoimidazole carboxylase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["AIRCr"]}, "metabolites": {"co2_c": -1.0, "5aizc_c": 1.0, "h_c": 1.0, "air_c": -1.0}, "id": "AIRCr", "gene_reaction_rule": "CLJU_RS04205"}, {"subsystem": "Peptidoglycan Biosynthesis", "name": "D-alanine-D-alanine ligase (reversible)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["ALAALAr"]}, "metabolites": {"atp_c": -1.0, "ala__D_c": -2.0, "h_c": 1.0, "adp_c": 1.0, "pi_c": 1.0, "alaala_c": 1.0}, "id": "ALAALAr", "gene_reaction_rule": "CLJU_RS15825"}, {"subsystem": "Alanine, aspartate and glutamate metabolism", "name": "Alanine racemase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["ALAR"]}, "metabolites": {"ala__D_c": 1.0, "ala__L_c": -1.0}, "id": "ALAR", "gene_reaction_rule": "CLJU_RS15830 or CLJU_RS19890 or CLJU_RS05895"}, {"subsystem": "Phenylalanine Metabolism", "name": "L-alanine transaminase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["ALATA_L"]}, "metabolites": {"akg_c": -1.0, "glu__L_c": 1.0, "ala__L_c": -1.0, "pyr_c": 1.0}, "id": "ALATA_L", "gene_reaction_rule": "CLJU_RS10450"}, {"subsystem": "Alternate Carbon Metabolism", "name": "Alcohol dehydrogenase (ethanol)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["ALCD2x"]}, "metabolites": {"acald_c": 1.0, "nadh_c": 1.0, "etoh_c": -1.0, "nad_c": -1.0, "h_c": 1.0}, "id": "ALCD2x", "gene_reaction_rule": "CLJU_RS05830 or CLJU_RS08100 or CLJU_RS08095"}, {"subsystem": "Alternate Carbon Metabolism", "name": "Alcohol dehydrogenase (ethanol, NADP)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ALCD2yi"]}, "metabolites": {"acald_c": -1.0, "nadp_c": 1.0, "nadph_c": -1.0, "h_c": -1.0, "etoh_c": 1.0}, "id": "ALCD2yi", "gene_reaction_rule": "CLJU_RS12245"}, {"subsystem": "SOB reactions", "name": "Alcohol dehydrogenase (butanol)", "upper_bound": 0.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ALCD4"]}, "metabolites": {"btal_c": 1.0, "nadh_c": 1.0, "h_c": 1.0, "nad_c": -1.0, "btoh_c": -1.0}, "id": "ALCD4", "gene_reaction_rule": "CLJU_RS08100 or CLJU_RS08095"}, {"name": "Alcohol dehydrogenase (butanol) NADP depnedent", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ALCD4y"]}, "metabolites": {"btal_c": 1.0, "nadp_c": -1.0, "nadph_c": 1.0, "h_c": 1.0, "btoh_c": -1.0}, "id": "ALCD4y", "gene_reaction_rule": "CLJU_RS12255 or CLJU_RS19680"}, {"subsystem": "Purine metabolism", "name": "Allantoinase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ALLTN"]}, "metabolites": {"alltt_c": 1.0, "h2o_c": -1.0, "h_c": 1.0, "alltn_c": -1.0}, "id": "ALLTN", "gene_reaction_rule": "CLJU_RS07520 or CLJU_RS07515"}, {"subsystem": "Purine metabolism", "name": "Allantoin transport in via proton symport", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["ALLTNt2r"]}, "metabolites": {"alltn_e": -1.0, "h_e": -1.0, "h_c": 1.0, "alltn_c": 1.0}, "id": "ALLTNt2r", "gene_reaction_rule": "CLJU_RS07525 or CLJU_RS07510"}, {"subsystem": "Peptidoglycan Biosynthesis", "name": "N-acetylmuramoyl-L-alanine amidase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["AMAA"]}, "metabolites": {"acmama_c": -1.0, "ala__L_c": 1.0, "acmam_c": 1.0, "h2o_c": -1.0}, "id": "AMAA", "gene_reaction_rule": "CLJU_RS02360 or CLJU_RS15325 or CLJU_RS00915 or CLJU_RS19935"}, {"subsystem": "Ubiquinone and other terpenoid-quinone biosynthesis", "name": "S-adenosylmethione:2-demthylmenaquinole methyltransferase (menaquinone 8)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["AMMQLT8"]}, "metabolites": {"amet_c": -1.0, "mql8_c": 1.0, "ahcys_c": 1.0, "h_c": 1.0, "2dmmql8_c": -1.0}, "id": "AMMQLT8", "gene_reaction_rule": "CLJU_RS19845"}, {"subsystem": "Phenylalanine, tyrosine and tryptophan biosynthesis", "name": "Anthranilate phosphoribosyltransferase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ANPRT"]}, "metabolites": {"anth_c": -1.0, "ppi_c": 1.0, "prpp_c": -1.0, "pran_c": 1.0}, "id": "ANPRT", "gene_reaction_rule": "CLJU_RS07885"}, {"subsystem": "Phenylalanine, tyrosine and tryptophan biosynthesis", "name": "Anthranilate synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ANS"]}, "metabolites": {"anth_c": 1.0, "pyr_c": 1.0, "chor_c": -1.0, "h_c": 1.0, "glu__L_c": 1.0, "gln__L_c": -1.0}, "id": "ANS", "gene_reaction_rule": "CLJU_RS07875 and CLJU_RS07880"}, {"subsystem": "Phenylalanine, tyrosine and tryptophan biosynthesis", "name": "ANS2", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ANS2"]}, "metabolites": {"anth_c": 1.0, "h2o_c": 1.0, "pyr_c": 1.0, "chor_c": -1.0, "h_c": 1.0, "nh4_c": -1.0}, "id": "ANS2", "gene_reaction_rule": "CLJU_RS07875 and CLJU_RS07880"}, {"subsystem": "Central Metabolism", "name": "Acetaldehyde:ferredoxin oxidoreductase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["AOR_CL"]}, "metabolites": {"h2o_c": 1.0, "acald_c": 1.0, "fdxr_4_2_c": -1.0, "h_c": -3.0, "ac_c": -1.0, "fdxo_4_2_c": 1.0}, "id": "AOR_CL", "gene_reaction_rule": "CLJU_RS09915 or CLJU_RS09865"}, {"subsystem": "Vitamins & Cofactor Biosynthesis", "name": "5-amino-6-(5-phosphoribosylamino)uracil reductase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["APRAUR"]}, "metabolites": {"5apru_c": -1.0, "nadp_c": 1.0, "nadph_c": -1.0, "h_c": -1.0, "5aprbu_c": 1.0}, "id": "APRAUR", "gene_reaction_rule": "CLJU_RS10840"}, {"subsystem": "Sulfur Metabolism", "name": "APSR", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["APSPr"]}, "metabolites": {"so3_c": 1.0, "aps_c": -1.0, "trdox_c": 1.0, "h_c": 2.0, "trdrd_c": -1.0, "amp_c": 1.0}, "id": "APSR", "gene_reaction_rule": ""}, {"name": "Arabinose reductase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ARABR"]}, "metabolites": {"abt_c": 1.0, "nadp_c": 1.0, "nadph_c": -1.0, "h_c": -1.0, "arab__L_c": -1.0}, "id": "ARABR", "gene_reaction_rule": "CLJU_RS08755"}, {"subsystem": "Pentose and Glucuronate Interconversions", "name": "L-arabinose isomerase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["ARAI"]}, "metabolites": {"rbl__L_c": 1.0, "arab__L_c": -1.0}, "id": "ARAI", "gene_reaction_rule": "CLJU_RS00585"}, {"subsystem": "Transport", "name": "ARBabc", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ARBabc"]}, "metabolites": {"h2o_c": -1.0, "atp_c": -1.0, "arab__L_e": -1.0, "arab__L_c": 1.0, "adp_c": 1.0, "pi_c": 1.0, "h_c": 1.0}, "id": "ARBabc", "gene_reaction_rule": "CLJU_RS00965"}, {"subsystem": "Transport", "name": "ARBt2r", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["ARBt2r"]}, "metabolites": {"arab__L_e": -1.0, "h_e": -1.0, "h_c": 1.0, "arab__L_c": 1.0}, "id": "ARBt2r", "gene_reaction_rule": "CLJU_RS00610"}, {"subsystem": "Arginine and Proline Metabolism", "name": "Arginine deiminase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ARGD"]}, "metabolites": {"h2o_c": -1.0, "citr__L_c": 1.0, "arg__L_c": -1.0, "nh4_c": 1.0}, "id": "ARGDr", "gene_reaction_rule": "CLJU_RS04570"}, {"subsystem": "Arginine and proline metabolism", "name": "Arginine decarboxylase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ARGDC"]}, "metabolites": {"agm_c": 1.0, "co2_c": 1.0, "arg__L_c": -1.0, "h_c": -1.0}, "id": "ARGDC", "gene_reaction_rule": "CLJU_RS00675 or CLJU_RS16870"}, {"subsystem": "Arginine and Proline Metabolism", "name": "Arginase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ARGN"]}, "metabolites": {"orn_c": 1.0, "h2o_c": -1.0, "urea_c": 1.0, "arg__L_c": -1.0}, "id": "ARGN", "gene_reaction_rule": "CLJU_RS10765"}, {"subsystem": "Alanine, aspartate and glutamate metabolism", "name": "Argininosuccinate lyase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["ARGSL"]}, "metabolites": {"argsuc_c": -1.0, "fum_c": 1.0, "arg__L_c": 1.0}, "id": "ARGSL", "gene_reaction_rule": "CLJU_RS03300"}, {"subsystem": "Alanine, aspartate and glutamate metabolism", "name": "Argininosuccinate synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ARGSS"]}, "metabolites": {"atp_c": -1.0, "asp__L_c": -1.0, "ppi_c": 1.0, "argsuc_c": 1.0, "amp_c": 1.0, "citr__L_c": -1.0, "h_c": 1.0}, "id": "ARGSS", "gene_reaction_rule": "CLJU_RS03295"}, {"subsystem": "Transport", "name": "L arganine reversible transport via proton symport", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["ARGt2r"]}, "metabolites": {"arg__L_e": -1.0, "h_e": -1.0, "arg__L_c": 1.0, "h_c": 1.0}, "id": "ARGt2r", "gene_reaction_rule": "(CLJU_RS02325 and CLJU_RS02330) or CLJU_RS10530 or CLJU_RS13850"}, {"subsystem": "Lysine Biosynthesis", "name": "Aspartate-semialdehyde dehydrogenase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["ASAD"]}, "metabolites": {"aspsa_c": -1.0, "nadp_c": -1.0, "nadph_c": 1.0, "h_c": 1.0, "pi_c": -1.0, "4pasp_c": 1.0}, "id": "ASAD", "gene_reaction_rule": "CLJU_RS17045"}, {"subsystem": "Alanine, aspartate and glutamate metabolism", "name": "Asparagine synthase (glutamine-hydrolysing)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ASNS1"]}, "metabolites": {"h2o_c": -1.0, "atp_c": -1.0, "asp__L_c": -1.0, "asn__L_c": 1.0, "glu__L_c": 1.0, "h_c": 1.0, "amp_c": 1.0, "ppi_c": 1.0, "gln__L_c": -1.0}, "id": "ASNS1", "gene_reaction_rule": "CLJU_RS08700 or CLJU_RS13170"}, {"subsystem": "Transport", "name": "L asparagine reversible transport via proton symport", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["ASNt2r"]}, "metabolites": {"asn__L_c": 1.0, "h_e": -1.0, "asn__L_e": -1.0, "h_c": 1.0}, "id": "ASNt2r", "gene_reaction_rule": ""}, {"subsystem": "Pantothenate and CoA biosynthesis", "name": "Aspartate 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"CLJU_RS11425"}, {"subsystem": "Transport", "name": " R R  butanediol transport", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["BTDt-RR"]}, "metabolites": {"btd_RR_e": 1.0, "btd_RR_c": -1.0}, "id": "BTDt_RR", "gene_reaction_rule": ""}, {"subsystem": "Transport", "name": "Biotin uptake", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["BTNt2i"]}, "metabolites": {"btn_c": 1.0, "h_e": -1.0, "btn_e": -1.0, "h_c": 1.0}, "id": "BTNt2i", "gene_reaction_rule": "CLJU_RS12040"}, {"subsystem": "SOB reactions", "name": "Butanol transport by diffusion", "upper_bound": 0.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["BTOHt"]}, "metabolites": {"btoh_e": -1.0, "btoh_c": 1.0}, "id": "BTOHt", "gene_reaction_rule": ""}, {"subsystem": "SOB reactions", "name": "Butyrate kinase", "upper_bound": 0.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["BUTKr"]}, "metabolites": {"but_c": -1.0, "butpi_c": 1.0, "atp_c": -1.0, "adp_c": 1.0}, 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{"subsystem": "Transport", "name": "CO2 transporter via diffusion", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["CO2t"]}, "metabolites": {"co2_c": 1.0, "co2_e": -1.0}, "id": "CO2t", "gene_reaction_rule": ""}, {"subsystem": "Wood Ljungadhl Pathway", "name": "Carbon monoxide dehydrogenase / acetyl-CoA synthase 2", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["CODH4"]}, "metabolites": {"co_c": -1.0, "h2o_c": -1.0, "fdxr_4_2_c": 1.0, "h_c": 2.0, "co2_c": 1.0, "fdxo_4_2_c": -1.0}, "id": "CODH4_1", "gene_reaction_rule": "CLJU_RS04480 and CLJU_RS04485 and CLJU_RS04490"}, {"subsystem": "Wood Ljungadhl Pathway", "name": "CODH/Acetyl-CoA synthase (Wood-Ljundahl)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["CODH_ACS"]}, "metabolites": {"cfesp_c": 1.0, "h2o_c": 1.0, "fdxr_4_2_c": -1.0, "coa_c": -1.0, "h_c": -1.0, "accoa_c": 1.0, "co2_c": -1.0, "mecfsp_c": -1.0, "fdxo_4_2_c": 1.0}, "id": "CODH_ACS", 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0.0, "notes": {"original_bigg_ids": ["DUTPDP"]}, "metabolites": {"h2o_c": -1.0, "ppi_c": 1.0, "dutp_c": -1.0, "dump_c": 1.0, "h_c": 1.0}, "id": "DUTPDP", "gene_reaction_rule": "CLJU_RS04975"}, {"subsystem": "Vitamins & Cofactor Biosynthesis", "name": "1-deoxy-D-xylulose reductoisomerase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["DXPRIi"]}, "metabolites": {"2me4p_c": 1.0, "dxyl5p_c": -1.0, "nadp_c": 1.0, "nadph_c": -1.0, "h_c": -1.0}, "id": "DXPRIi", "gene_reaction_rule": "CLJU_RS06420"}, {"subsystem": "Vitamins & Cofactor Biosynthesis", "name": "1-deoxy-D-xylulose 5-phosphate synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["DXPS"]}, "metabolites": {"pyr_c": -1.0, "dxyl5p_c": 1.0, "co2_c": 1.0, "g3p_c": -1.0, "h_c": -1.0}, "id": "DXPS", "gene_reaction_rule": "CLJU_RS05470"}, {"subsystem": "Fatty Acid  Biosynthesis", "name": "Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C10:0)", "upper_bound": 1000.0, 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{"subsystem": "Nitrate Reduction Pathway", "name": "Hydroxylamine reductase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["HAMR"]}, "metabolites": {"ham_c": -1.0, "h2o_c": 1.0, "h_c": -2.0, "nad_c": 1.0, "nadh_c": -1.0, "nh4_c": 1.0}, "id": "HAMR", "gene_reaction_rule": "CLJU_RS13445 or CLJU_RS03805"}, {"subsystem": "Amino Acid Metabolism", "name": "Homocitrate synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["HCITS"]}, "metabolites": {"akg_c": -1.0, "h2o_c": -1.0, "hcit_c": 1.0, "coa_c": 1.0, "h_c": 1.0, "accoa_c": -1.0}, "id": "HCITS", "gene_reaction_rule": "CLJU_RS02440"}, {"subsystem": "Other", "name": "HCO3 equilibration reaction", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["HCO3E"]}, "metabolites": {"hco3_c": 1.0, "h2o_c": -1.0, "co2_c": -1.0, "h_c": 1.0}, "id": "HCO3E", "gene_reaction_rule": ""}, {"subsystem": "Thiamine Metabolism", "name": "Hydroxyethylthiazole kinase", 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"gene_reaction_rule": "CLJU_RS10465"}, {"subsystem": "Valine, leucine and isoleucine biosynthesis", "name": "3-isopropylmalate dehydrogenase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["IPMD"]}, "metabolites": {"3c4mop_c": 1.0, "3c2hmp_c": -1.0, "nadh_c": 1.0, "h_c": 1.0, "nad_c": -1.0}, "id": "IPMD", "gene_reaction_rule": "CLJU_RS19450 or CLJU_RS04475"}, {"subsystem": "Valine, leucine and isoleucine biosynthesis", "name": "3-isopropylmalate dehydratase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["IPPMIa"]}, "metabolites": {"2ippm_c": 1.0, "h2o_c": 1.0, "3c2hmp_c": -1.0}, "id": "IPPMIa", "gene_reaction_rule": "CLJU_RS04465 and CLJU_RS04470"}, {"subsystem": "Valine, leucine and isoleucine biosynthesis", "name": "2-isopropylmalate hydratase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["IPPMIb"]}, "metabolites": {"2ippm_c": -1.0, "h2o_c": -1.0, "3c3hmp_c": 1.0}, "id": "IPPMIb", "gene_reaction_rule": "CLJU_RS04465 and CLJU_RS04470"}, {"subsystem": "Valine, leucine and isoleucine biosynthesis", "name": "2-isopropylmalate synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["IPPS"]}, "metabolites": {"h2o_c": -1.0, "accoa_c": -1.0, "3mob_c": -1.0, "coa_c": 1.0, "h_c": 1.0, "3c3hmp_c": 1.0}, "id": "IPPS", "gene_reaction_rule": "CLJU_RS04460"}, {"subsystem": "Histidine metabolism", "name": "Imidazolonepropionase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["IZPN"]}, "metabolites": {"h2o_c": -1.0, "4izp_c": -1.0, "h_c": 1.0, "forglu_c": 1.0}, "id": "IZPN", "gene_reaction_rule": "CLJU_RS10540"}, {"subsystem": "Valine, leucine and isoleucine biosynthesis", "name": "Ketol-acid reductoisomerase (2,3-dihydroxy-3-methylbutanoate)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["KARA1"]}, "metabolites": {"nadp_c": -1.0, "nadph_c": 1.0, "h_c": 1.0, "23dhmb_c": -1.0, "alac__S_c": 1.0}, "id": "KARA1", "gene_reaction_rule": "CLJU_RS10010 or CLJU_RS10005 or CLJU_RS07505"}, {"subsystem": "Valine, leucine and isoleucine biosynthesis", "name": "Ketol-acid reductoisomerase (2-Acetolactate)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["KARA2"]}, "metabolites": {"2ahbut_c": -1.0, "23dhmp_c": 1.0, "nadp_c": 1.0, "nadph_c": -1.0, "h_c": -1.0}, "id": "KARA2", "gene_reaction_rule": "CLJU_RS10010 or CLJU_RS10005 or CLJU_RS07505"}, {"subsystem": "Fatty Acid  Biosynthesis", "name": "Beta-ketoacyl-ACP synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["KAS14"]}, "metabolites": {"acACP_c": -1.0, "ACP_c": 1.0, "malACP_c": -1.0, "h_c": -1.0, "actACP_c": 1.0, "co2_c": 1.0}, "id": "KAS14", "gene_reaction_rule": "CLJU_RS20760"}, {"subsystem": "Fatty Acid  Biosynthesis", "name": "Beta-ketoacyl-ACP synthase (2)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["KAS15"]}, "metabolites": {"malACP_c": -1.0, "coa_c": 1.0, "h_c": -1.0, "accoa_c": -1.0, "actACP_c": 1.0, "co2_c": 1.0}, "id": "KAS15", "gene_reaction_rule": "CLJU_RS20780"}, {"subsystem": "Transport", "name": "Potassium ABC transporter", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["Kabc"]}, "metabolites": {"h2o_c": -1.0, "atp_c": -1.0, "h_c": 1.0, "adp_c": 1.0, "k_c": 1.0, "pi_c": 1.0, "k_e": -1.0}, "id": "Kabc", "gene_reaction_rule": "CLJU_RS19480 and CLJU_RS19475 and CLJU_RS19470"}, {"subsystem": "Fructose and Mannose Metabolism", "name": "Lacaldehyde reductase (S-propane-1,2-diol forming)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["LCARS"]}, "metabolites": {"lald__L_c": -1.0, "nadh_c": -1.0, "12ppd__S_c": 1.0, "h_c": -1.0, "nad_c": 1.0}, "id": "LCARS", "gene_reaction_rule": "CLJU_RS17680"}, {"name": "D-lactate dehydrogenase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["LDH_D"]}, "metabolites": {"pyr_c": 1.0, "nadh_c": 1.0, "lac__D_c": -1.0, "h_c": 1.0, "nad_c": -1.0}, "id": "LDH_D", "gene_reaction_rule": "CLJU_RS15865"}, {"subsystem": "Valine, leucine and isoleucine biosynthesis", "name": "Leucine transaminase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["LEUTA"]}, "metabolites": {"akg_c": -1.0, "leu__L_c": -1.0, "4mop_c": 1.0, "glu__L_c": 1.0}, "id": "LEUTA", "gene_reaction_rule": "CLJU_RS04310 or CLJU_RS04620"}, {"subsystem": "Aminoacyl-tRNA biosynthesis", "name": "Leucyl-tRNA synthetase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["LEUTRS"]}, "metabolites": {"leutrna_c": 1.0, "leu__L_c": -1.0, "atp_c": -1.0, "ppi_c": 1.0, "amp_c": 1.0, "trnaleu_c": -1.0}, "id": "LEUTRS", "gene_reaction_rule": "CLJU_RS01345"}, {"subsystem": "Transport", "name": "L leucine reversible transport via proton symport", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["LEUt2r"]}, "metabolites": {"leu__L_c": 1.0, "h_e": -1.0, "leu__L_e": -1.0, "h_c": 1.0}, "id": "LEUt2r", "gene_reaction_rule": "CLJU_RS08715"}, {"subsystem": "Arginine and proline metabolism", "name": "Lysine decarboxylase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["LYSDC"]}, "metabolites": {"15dap_c": 1.0, "co2_c": 1.0, "lys__L_c": -1.0, "h_c": -1.0}, "id": "LYSDC", "gene_reaction_rule": "CLJU_RS16870 or CLJU_RS00675"}, {"subsystem": "Transport", "name": "L lysine reversible transport via proton symport", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["LYSt2r"]}, "metabolites": {"lys__L_e": -1.0, "h_e": -1.0, "lys__L_c": 1.0, "h_c": 1.0}, "id": "LYSt2r", "gene_reaction_rule": "CLJU_RS10705 or CLJU_RS11985"}, {"subsystem": "Transport", "name": "Maltohexaose transport via ABC system", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["MALTHXabc"]}, "metabolites": {"h2o_c": -1.0, "malthx_c": 1.0, "atp_c": -1.0, "malthx_e": -1.0, "h_c": 1.0, "adp_c": 1.0, "pi_c": 1.0}, "id": "MALTHXabc", "gene_reaction_rule": "CLJU_RS08285"}, {"subsystem": "Transport", "name": "Maltotriose transport via ABC system", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["MALTTRabc"]}, "metabolites": {"h2o_c": -1.0, "atp_c": -1.0, "h_c": 1.0, "adp_c": 1.0, "malttr_e": -1.0, "pi_c": 1.0, "malttr_c": 1.0}, "id": "MALTTRabc", "gene_reaction_rule": "CLJU_RS08285"}, {"subsystem": "Transport", "name": "Maltose transport via ABC system", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["MALTabc"]}, "metabolites": {"h2o_c": -1.0, "atp_c": -1.0, "h_c": 1.0, "adp_c": 1.0, "malt_c": 1.0, "pi_c": 1.0, "malt_e": -1.0}, "id": "MALTabc", "gene_reaction_rule": "CLJU_RS08285"}, {"subsystem": "Fructose and Mannose Metabolism", "name": "Mannose-1-phosphate guanylyltransferase (GDP)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["MAN1PT2"]}, "metabolites": {"man1p_c": -1.0, "pi_c": 1.0, "gdp_c": -1.0, "h_c": -1.0, "gdpmann_c": 1.0}, "id": "MAN1PT2", "gene_reaction_rule": "CLJU_RS02725 or CLJU_RS02610 or CLJU_RS00940"}, {"subsystem": "Central Metabolism", "name": "Mannose-6-phosphate isomerase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["MAN6PI"]}, "metabolites": {"man6p_c": -1.0, "f6p_c": 1.0}, "id": "MAN6PI", "gene_reaction_rule": "CLJU_RS19425"}, {"subsystem": "Transport", "name": "D-mannose transport via PEP:Pyr PTS", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["MANpts"]}, "metabolites": {"pep_c": -1.0, "man_e": -1.0, "pyr_c": 1.0, "man6p_c": 1.0}, "id": "MANpts", "gene_reaction_rule": "CLJU_RS01445"}, {"subsystem": "Fatty Acid  Biosynthesis", "name": "Malonyl-CoA-ACP transacylase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["MCOATA"]}, "metabolites": {"coa_c": 1.0, "ACP_c": -1.0, "malACP_c": 1.0, "malcoa_c": -1.0}, "id": "MCOATA", "gene_reaction_rule": "CLJU_RS06285 and CLJU_RS20770"}, {"subsystem": "Cell Envelope Biosynthesis", "name": "Murein crosslinking transpeptidase 1A:(A2pm->D-ala) (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["MCTP1Aex"]}, "metabolites": {"murein5p5p_e": -1.0, "ala__D_e": 1.0, "murein5px4p_e": 1.0}, "id": "MCTP1Aex", "gene_reaction_rule": "CLJU_RS03570 or CLJU_RS16730"}, {"subsystem": "Cell Envelope Biosynthesis", "name": "Murein crosslinking transpeptidase 1B:(A2pm->A2pm) (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["MCTP1Bex"]}, "metabolites": {"alaala_e": 1.0, "murein5px3p_e": 1.0, "murein5p5p_e": -1.0}, "id": "MCTP1Bex", "gene_reaction_rule": "CLJU_RS16730"}, {"subsystem": "Cell Envelope Biosynthesis", "name": "Murein crosslinking transpeptidase 1A:(A2pm->D-ala) (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["MCTP2Aex"]}, "metabolites": 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Cycle", "name": "Malate dehydrogenase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["MDH"]}, "metabolites": {"mal__L_c": -1.0, "nadh_c": 1.0, "oaa_c": 1.0, "h_c": 1.0, "nad_c": -1.0}, "id": "MDH", "gene_reaction_rule": "CLJU_RS02910"}, {"subsystem": "Pyruvate Metabolism", "name": "Malic enzyme (NAD)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ME1"]}, "metabolites": {"pyr_c": 1.0, "co2_c": 1.0, "nadh_c": 1.0, "nad_c": -1.0, "mal__L_c": -1.0}, "id": "ME1", "gene_reaction_rule": "CLJU_RS15045 or CLJU_RS12495"}, {"subsystem": "Pyruvate Metabolism", "name": "Malic enzyme (NADP)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ME2"]}, "metabolites": {"nadph_c": 1.0, "pyr_c": 1.0, "co2_c": 1.0, "nadp_c": -1.0, "mal__L_c": -1.0}, "id": "ME2", "gene_reaction_rule": "CLJU_RS02030 or CLJU_RS18940"}, {"subsystem": "Ubiquinone and other terpenoid-quinone biosynthesis", "name": "2C-methyl-D-erythritol 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"lower_bound": 0.0, "notes": {"original_bigg_ids": ["RBK_L1"]}, "metabolites": {"rbl__L_c": -1.0, "atp_c": -1.0, "h_c": 1.0, "adp_c": 1.0, "ru5p__L_c": 1.0}, "id": "RBK_L1", "gene_reaction_rule": "CLJU_RS00595"}, {"subsystem": "Pentose and Glucuronate Interconversions", "name": "L-ribulose-phosphate 4-epimerase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["RBP4E"]}, "metabolites": {"xu5p__D_c": 1.0, "ru5p__L_c": -1.0}, "id": "RBP4E", "gene_reaction_rule": "CLJU_RS00590"}, {"subsystem": "Methionine Metabolism", "name": "S-ribosylhomocysteine cleavage enzyme", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["RHCCE"]}, "metabolites": {"hcys__L_c": 1.0, "rhcys_c": -1.0, "dhptd_c": 1.0}, "id": "RHCCE", "gene_reaction_rule": "CLJU_RS11545"}, {"subsystem": "Transport", "name": "Riboflavin transport in via proton symport", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["RIBFLVt2"]}, "metabolites": {"ribflv_e": -1.0, "h_e": -1.0, "h_c": 1.0, "ribflv_c": 1.0}, "id": "RIBFLVt2", "gene_reaction_rule": "CLJU_RS01315"}, {"subsystem": "Transport", "name": "D-ribose transport via ABC system", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["RIBabc"]}, "metabolites": {"h2o_c": -1.0, "pi_c": 1.0, "atp_c": -1.0, "h_c": 1.0, "adp_c": 1.0, "rib__D_e": -1.0, "rib__D_c": 1.0}, "id": "RIBabc", "gene_reaction_rule": "CLJU_RS00620 and CLJU_RS00615 and CLJU_RS00625"}, {"subsystem": "Fructose and Mannose Metabolism", "name": "L-rhamnose isomerase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["RMI"]}, "metabolites": {"rmn_c": -1.0, "rml_c": 1.0}, "id": "RMI", "gene_reaction_rule": "CLJU_RS20990"}, {"subsystem": "Fructose and Mannose Metabolism", "name": "Rhamnulokinase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["RMK"]}, "metabolites": {"adp_c": 1.0, "rml1p_c": 1.0, "h_c": 1.0, "rml_c": -1.0, "atp_c": -1.0}, "id": "RMK", "gene_reaction_rule": "CLJU_RS20995"}, {"subsystem": "Fructose and Mannose Metabolism", "name": "L rhamnose transport via proton symport", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["RMNt"]}, "metabolites": {"rmn_c": 1.0, "h_e": -1.0, "h_c": 1.0, "rmn_e": -1.0}, "id": "RMNt", "gene_reaction_rule": "CLJU_RS20980"}, {"subsystem": "Fructose and Mannose Metabolism", "name": "Rhamnulose-1-phosphate aldolase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["RMPA"]}, "metabolites": {"dhap_c": 1.0, "lald__L_c": 1.0, "rml1p_c": -1.0}, "id": "RMPA", "gene_reaction_rule": "CLJU_RS20985"}, {"subsystem": "Nucelotide Metabolism", "name": "Ribonucleoside-diphosphate reductase (ADP)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["RNDR1"]}, "metabolites": {"dadp_c": 1.0, "h2o_c": 1.0, "trdox_c": 1.0, "trdrd_c": -1.0, "adp_c": -1.0}, "id": "RNDR1", "gene_reaction_rule": "CLJU_RS03365"}, {"name": "Ribonucleoside-diphosphate reductase (GDP)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["RNDR2"]}, "metabolites": {"dgdp_c": 1.0, "h2o_c": 1.0, "trdox_c": 1.0, "gdp_c": -1.0, "trdrd_c": -1.0}, "id": "RNDR2", "gene_reaction_rule": "CLJU_RS03365"}, {"name": "Ribonucleoside-diphosphate reductase (CDP)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["RNDR3"]}, "metabolites": {"cdp_c": -1.0, "trdox_c": 1.0, "dcdp_c": 1.0, "h2o_c": 1.0, "trdrd_c": -1.0}, "id": "RNDR3", "gene_reaction_rule": "CLJU_RS03365"}, {"name": "Ribonucleoside-diphosphate reductase (UDP)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["RNDR4"]}, "metabolites": {"udp_c": -1.0, "trdox_c": 1.0, "trdrd_c": -1.0, "h2o_c": 1.0, "dudp_c": 1.0}, "id": "RNDR4", "gene_reaction_rule": "CLJU_RS03365"}, {"name": "Ferredoxin:NAD oxidoreductase ( 2 protons traslocation)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["RNF"]}, "metabolites": {"fdxr_4_2_c": -1.0, "h_e": 2.0, "h_c": -3.0, "nad_c": -1.0, "nadh_c": 1.0, "fdxo_4_2_c": 1.0}, "id": "RNF", "gene_reaction_rule": "CLJU_RS05590 and CLJU_RS05595 and CLJU_RS05570 and CLJU_RS05575 and CLJU_RS05585 and CLJU_RS05580"}, {"name": "Ribonucleoside triphosphate reductase  ATP ", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["RNTR1"]}, "metabolites": {"datp_c": 1.0, "h2o_c": 1.0, "trdox_c": 1.0, "trdrd_c": -1.0, "atp_c": -1.0}, "id": "RNTR1", "gene_reaction_rule": "CLJU_RS00895"}, {"name": "Ribonucleoside triphosphate reductase  GTP ", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["RNTR2"]}, "metabolites": {"trdox_c": 1.0, "dgtp_c": 1.0, "gtp_c": -1.0, "trdrd_c": -1.0, "h2o_c": 1.0}, "id": "RNTR2", "gene_reaction_rule": "CLJU_RS00895"}, {"name": "Ribonucleoside triphosphate reductase  CTP ", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["RNTR3"]}, "metabolites": {"ctp_c": -1.0, "trdox_c": 1.0, "dctp_c": 1.0, "h2o_c": 1.0, "trdrd_c": -1.0}, "id": "RNTR3", "gene_reaction_rule": "CLJU_RS00895"}, {"name": "Ribonucleoside triphosphate reductase  UTP ", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["RNTR4"]}, "metabolites": {"dutp_c": 1.0, "utp_c": -1.0, "trdox_c": 1.0, "h2o_c": 1.0, "trdrd_c": -1.0}, "id": "RNTR4", "gene_reaction_rule": "CLJU_RS00895"}, {"subsystem": "Central Metabolism", "name": "Ribulose 5-phosphate 3-epimerase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["RPE"]}, "metabolites": {"xu5p__D_c": 1.0, "ru5p__D_c": -1.0}, "id": "RPE", "gene_reaction_rule": "CLJU_RS06205"}, {"subsystem": "Central Metabolism", "name": "Ribose-5-phosphate isomerase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["RPI"]}, "metabolites": {"r5p_c": -1.0, "ru5p__D_c": 1.0}, "id": "RPI", "gene_reaction_rule": "CLJU_RS01130"}, {"subsystem": "Porphyrin and Chlorophyll Metabolism", "name": "Alpha-ribazole 5-phosphate phosphatase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["RZ5PP"]}, "metabolites": {"5prdmbz_c": -1.0, "h2o_c": -1.0, "pi_c": 1.0, "rdmbzi_c": 1.0}, "id": "RZ5PP", "gene_reaction_rule": "CLJU_RS17500"}, {"subsystem": "Sulfur Metabolism", "name": "Sulfate adenyltransferase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["SADT2"]}, "metabolites": {"h2o_c": -1.0, "gdp_c": 1.0, "aps_c": 1.0, "atp_c": -1.0, "ppi_c": 1.0, "so4_c": -1.0, "gtp_c": -1.0, "pi_c": 1.0}, "id": "SADT2", "gene_reaction_rule": ""}, {"subsystem": "Lysine Biosynthesis", "name": "Succinyl-diaminopimelate desuccinylase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["SDPDS"]}, "metabolites": {"26dap_LL_c": 1.0, "sl26da_c": -1.0, "h2o_c": -1.0, "succ_c": 1.0}, "id": "SDPDS", "gene_reaction_rule": "CLJU_RS08540"}, {"subsystem": "Lysine Biosynthesis", "name": "Succinyldiaminopimelate transaminase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["SDPTA"]}, "metabolites": {"akg_c": -1.0, "sl2a6o_c": 1.0, "glu__L_c": 1.0, "sl26da_c": -1.0}, "id": "SDPTA", "gene_reaction_rule": "CLJU_RS10560"}, {"subsystem": "Selenocompound metabolism", "name": "Selenophosphate synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["SELNPS"]}, "metabolites": {"seln_c": -1.0, "atp_c": -1.0, "h2o_c": -1.0, "selnp_c": 1.0, "amp_c": 1.0, "pi_c": 1.0}, "id": "SELNPS", "gene_reaction_rule": "CLJU_RS03675 or CLJU_RS13685"}, {"subsystem": "Cysteine and Methionine Metabolism", "name": "Serine O-acetyltransferase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["SERAT"]}, "metabolites": {"ser__L_c": -1.0, "acser_c": 1.0, "coa_c": 1.0, "accoa_c": -1.0}, "id": "SERAT", "gene_reaction_rule": "CLJU_RS19350"}, {"subsystem": "Glycine, serine and threonine 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"Sirohydrochlorin cobaltochelatase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["SHCHCC"]}, "metabolites": {"dscl_c": -1.0, "h_c": 3.0, "cobalt2_c": -1.0, "copre2_c": 1.0}, "id": "SHCHCC", "gene_reaction_rule": "CLJU_RS15695"}, {"subsystem": "Porphyrin and Chlorophyll Metabolism", "name": "Sirohydrochlorin dehydrogenase (NAD)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["SHCHD2"]}, "metabolites": {"dscl_c": -1.0, "nadh_c": 1.0, "scl_c": 1.0, "nad_c": -1.0, "h_c": 1.0}, "id": "SHCHD2", "gene_reaction_rule": "CLJU_RS15765"}, {"subsystem": "Porphyrin and Chlorophyll Metabolism", "name": "Sirohydrochlorin ferrochelatase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["SHCHF"]}, "metabolites": {"fe2_c": -1.0, "sheme_c": 1.0, "scl_c": -1.0, "h_c": 3.0}, "id": "SHCHF", "gene_reaction_rule": "CLJU_RS15765"}, {"subsystem": "Phenylalanine, tyrosine and tryptophan biosynthesis", "name": "Shikimate 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{"subsystem": "Pentose Phosphate Pathway", "name": "Transketolase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["TKT1"]}, "metabolites": {"r5p_c": -1.0, "xu5p__D_c": -1.0, "g3p_c": 1.0, "s7p_c": 1.0}, "id": "TKT1", "gene_reaction_rule": "(CLJU_RS01495 and CLJU_RS01500) or (CLJU_RS12720 and CLJU_RS12725)"}, {"subsystem": "Pentose Phosphate Pathway", "name": "Transketolase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["TKT2"]}, "metabolites": {"e4p_c": -1.0, "xu5p__D_c": -1.0, "g3p_c": 1.0, "f6p_c": 1.0}, "id": "TKT2", "gene_reaction_rule": "(CLJU_RS01495 and CLJU_RS01500) or (CLJU_RS12720 and CLJU_RS12725)"}, {"name": "Thymidylate synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["TMDS"]}, "metabolites": {"dtmp_c": 1.0, "dump_c": -1.0, "dhf_c": 1.0, "mlthf_c": -1.0}, "id": "TMDS", "gene_reaction_rule": ""}, {"subsystem": "Vitamins & Cofactor Biosynthesis", "name": "Thiamine kinase", 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["23dhmp[c]"]}, "compartment": "c", "name": "(R)-2,3-Dihydroxy-3-methylpentanoate", "id": "23dhmp_c"}, {"formula": "C13H15N4O12P", "notes": {"original_bigg_ids": ["25aics[c]"]}, "compartment": "c", "name": "(S)-2-[5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido]succinate", "id": "25aics_c"}, {"formula": "C9H14N5O8P", "notes": {"original_bigg_ids": ["25dhpp[c]"]}, "compartment": "c", "name": "2 5 Diamino 6 hydroxy 4  5  phosphoribosylamino  pyrimidine C9H14N5O8P", "id": "25dhpp_c"}, {"formula": "C7H14N2O4", "notes": {"original_bigg_ids": ["26dap-LL[c]"]}, "compartment": "c", "name": "LL-2,6-Diaminoheptanedioate", "id": "26dap_LL_c"}, {"formula": "C7H14N2O4", "notes": {"original_bigg_ids": ["26dap-M[c]"]}, "compartment": "c", "name": "Meso-2,6-Diaminoheptanedioate", "id": "26dap__M_c"}, {"formula": "C6H9O4", "notes": {"original_bigg_ids": ["2ahbut[c]"]}, "compartment": "c", "name": "(S)-2-Aceto-2-hydroxybutanoate", "id": "2ahbut_c"}, {"formula": "C7H8N5O8P2", "notes": {"original_bigg_ids": ["2ahhmd[c]"]}, "compartment": "c", "name": "2 Amino 4 hydroxy 6 hydroxymethyl 7 8 dihydropteridine diphosphate C7H8N5O8P2", "id": "2ahhmd_c"}, {"formula": "C7H9N5O2", "notes": {"original_bigg_ids": ["2ahhmp[c]"]}, "compartment": "c", "name": "2 Amino 4 hydroxy 6 hydroxymethyl 7 8 dihydropteridine C7H9N5O2", "id": "2ahhmp_c"}, {"formula": "C12H13NO9P", "notes": {"original_bigg_ids": ["2cpr5p[c]"]}, "compartment": "c", "name": "1-(2-Carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate", "id": "2cpr5p_c"}, {"formula": "C7H10O10P", "notes": {"original_bigg_ids": ["2dda7p[c]"]}, "compartment": "c", "name": "2-Dehydro-3-deoxy-D-arabino-heptonate 7-phosphate", "id": "2dda7p_c"}, {"formula": "C6H8O9P", "notes": {"original_bigg_ids": ["2ddg6p[c]"]}, "compartment": "c", "name": "2-Dehydro-3-deoxy-D-gluconate 6-phosphate", "id": "2ddg6p_c"}, {"formula": "C6H9O4", "notes": {"original_bigg_ids": ["2dhp[c]"]}, "compartment": "c", "name": "2-Dehydropantoate", "id": "2dhp_c"}, {"formula": "C50H72O2", "notes": {"original_bigg_ids": ["2dmmql8[c]"]}, "compartment": "c", "name": "2-Demethylmenaquinol 8", "id": "2dmmql8_c"}, {"formula": "C5H9O7P", "notes": {"original_bigg_ids": ["2dr1p[c]"]}, "compartment": "c", "name": "2-Deoxy-D-ribose 1-phosphate", "id": "2dr1p_c"}, {"formula": "C5H9O7P", "notes": {"original_bigg_ids": ["2dr5p[c]"]}, "compartment": "c", "name": "2-Deoxy-D-ribose 5-phosphate", "id": "2dr5p_c"}, {"formula": "C3H3O4", "notes": {"original_bigg_ids": ["2h3oppan[c]"]}, "compartment": "c", "name": "2-Hydroxy-3-oxopropanoate", "id": "2h3oppan_c"}, {"formula": "C7H8O4", "notes": {"original_bigg_ids": ["2ippm[c]"]}, "compartment": "c", "name": "2-Isopropylmaleate", "id": "2ippm_c"}, {"formula": "C6H8N3O7P2", "notes": {"original_bigg_ids": ["2mahmp[c]"]}, "compartment": "c", "name": "2-Methyl-4-amino-5-hydroxymethylpyrimidine diphosphate", "id": "2mahmp_c"}, {"formula": "C5H11O7P", "notes": {"original_bigg_ids": ["2me4p[c]"]}, "compartment": "c", "name": "2-C-methyl-D-erythritol 4-phosphate", "id": "2me4p_c"}, {"formula": "C5H10O9P2", "notes": {"original_bigg_ids": ["2mecdp[c]"]}, "compartment": "c", "name": "2-C-methyl-D-erythritol 2,4-cyclodiphosphate", "id": "2mecdp_c"}, {"formula": "C4H5O3", "notes": {"original_bigg_ids": ["2obut[c]"]}, "compartment": "c", "name": "2-Oxobutanoate", "id": "2obut_c"}, {"formula": "C14H22N3O17P3", "notes": {"original_bigg_ids": ["2p4c2me[c]"]}, "compartment": "c", "name": "2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol", "id": "2p4c2me_c"}, {"formula": "C3H4O7P", "notes": {"original_bigg_ids": ["2pg[c]"]}, "compartment": "c", "name": "D-Glycerate 2-phosphate", "id": "2pg_c"}, {"formula": "C9H7O4", "notes": {"original_bigg_ids": ["34hpp[c]"]}, "compartment": "c", "name": "3-(4-Hydroxyphenyl)pyruvate", "id": "34hpp_c"}, {"formula": "C7H10O5", "notes": {"original_bigg_ids": ["3c2hmp[c]"]}, "compartment": "c", "name": "3-Carboxy-2-hydroxy-4-methylpentanoate", "id": "3c2hmp_c"}, {"formula": "C7H10O5", "notes": {"original_bigg_ids": ["3c3hmp[c]"]}, "compartment": "c", "name": "3-Carboxy-3-hydroxy-4-methylpentanoate", "id": "3c3hmp_c"}, {"formula": "C7H8O5", "notes": {"original_bigg_ids": ["3c4mop[c]"]}, "compartment": "c", "name": "3-Carboxy-4-methyl-2-oxopentanoate", "id": "3c4mop_c"}, {"formula": "C7H9O6", "notes": {"original_bigg_ids": ["3dhq[c]"]}, "compartment": "c", "name": "3-Dehydroquinate", "id": "3dhq_c"}, {"formula": "C7H7O5", "notes": {"original_bigg_ids": ["3dhsk[c]"]}, "compartment": "c", "name": "3-Dehydroshikimate", "id": "3dhsk_c"}, {"formula": "C15H27N2O9PRS", "notes": {"original_bigg_ids": ["3haACP[c]"]}, "compartment": "c", "name": "(3R)-3-Hydroxyacyl-[acyl-carrier protein]", "id": "3haACP_c"}, {"formula": "C25H38N7O18P3S", "notes": {"original_bigg_ids": ["3hbcoa[c]"]}, "compartment": "c", "name": "(S)-3-Hydroxybutanoyl-CoA", "id": "3hbcoa_c"}, {"formula": "C23H41N2O9PRS", "notes": {"original_bigg_ids": ["3hcddec5eACP[c]"]}, "compartment": "c", "name": "(R)-3-hydroxy-cis-dodec-5-enoyl-[acyl-carrier protein]", "id": "3hcddec5eACP_c"}, {"formula": "C25H45N2O9PRS", "notes": {"original_bigg_ids": ["3hcmrs7eACP[c]"]}, "compartment": "c", "name": "(R)-3-hydroxy-cis-myristol-7-eoyl-[acyl-carrier protein]", "id": "3hcmrs7eACP_c"}, {"formula": "C27H49N2O9PRS", "notes": {"original_bigg_ids": ["3hcpalm9eACP[c]"]}, "compartment": "c", "name": "(R)-3-hydroxy-cis-palm-9-eoyl-[acyl-carrier protein]", "id": "3hcpalm9eACP_c"}, {"formula": "C29H53N2O9PRS", "notes": {"original_bigg_ids": ["3hcvac11eACP[c]"]}, "compartment": "c", "name": "(R)-3-hydroxy-cis-vacc-11-enoyl-[acyl-carrier protein]", "id": "3hcvac11eACP_c"}, {"formula": "C23H43N2O9PRS", "notes": {"original_bigg_ids": ["3hddecACP[c]"]}, "compartment": "c", "name": "(R)-3-Hydroxydodecanoyl-[acyl-carrier protein]", "id": "3hddecACP_c"}, {"formula": "C21H39N2O9PRS", "notes": {"original_bigg_ids": ["3hdecACP[c]"]}, "compartment": "c", "name": "(R)-3-Hydroxydecanoyl-[acyl-carrier protein]", "id": "3hdecACP_c"}, {"formula": "C17H31N2O9PRS", "notes": {"original_bigg_ids": ["3hhexACP[c]"]}, "compartment": "c", "name": "(R)-3-Hydroxyhexanoyl-[acyl-carrier protein]", "id": "3hhexACP_c"}, {"formula": "C25H47N2O9PRS", "notes": {"original_bigg_ids": ["3hmrsACP[c]"]}, "compartment": "c", "name": "(R)-3-Hydroxytetradecanoyl-[acyl-carrier protein]", "id": "3hmrsACP_c"}, {"formula": "C19H35N2O9PRS", "notes": {"original_bigg_ids": ["3hoctACP[c]"]}, "compartment": "c", "name": "(R)-3-Hydroxyoctanoyl-[acyl-carrier protein]", "id": "3hoctACP_c"}, {"formula": "C29H55N2O9PRS", "notes": {"original_bigg_ids": ["3hoctaACP[c]"]}, "compartment": "c", "name": "(R)-3-Hydroxyoctadecanoyl-[acyl-carrier protein]", "id": "3hoctaACP_c"}, {"formula": "C27H51N2O9PRS", "notes": {"original_bigg_ids": ["3hpalmACP[c]"]}, "compartment": "c", "name": "R-3-hydroxypalmitoyl-[acyl-carrier protein]", "id": "3hpalmACP_c"}, {"formula": "C11H12NO6P", "notes": {"original_bigg_ids": ["3ig3p[c]"]}, "compartment": "c", "name": "C'-(3-Indolyl)-glycerol 3-phosphate", "id": "3ig3p_c"}, {"formula": "C5H7O3", "notes": {"original_bigg_ids": ["3mob[c]"]}, "compartment": "c", "name": "3-Methyl-2-oxobutanoate", "id": "3mob_c"}, {"formula": "C6H9O3", "notes": {"original_bigg_ids": ["3mop[c]"]}, "compartment": "c", "name": "(S)-3-Methyl-2-oxopentanoate", "id": "3mop_c"}, {"formula": "C23H39N2O9PRS", "notes": {"original_bigg_ids": ["3ocddec5eACP[c]"]}, "compartment": "c", "name": "3-oxo-cis-dodec-5-enoyl-[acyl-carrier protein]", "id": "3ocddec5eACP_c"}, {"formula": "C25H43N2O9PRS", "notes": {"original_bigg_ids": ["3ocmrs7eACP[c]"]}, "compartment": "c", "name": "3-oxo-cis-myristol-7-eoyl-[acyl-carrier protein]", "id": "3ocmrs7eACP_c"}, {"formula": "C27H47N2O9PRS", "notes": {"original_bigg_ids": ["3ocpalm9eACP[c]"]}, "compartment": "c", "name": "3-oxo-cis-palm-9-eoyl-[acyl-carrier protein]", "id": "3ocpalm9eACP_c"}, {"formula": "C29H51N2O9PRS", "notes": {"original_bigg_ids": ["3ocvac11eACP[c]"]}, "compartment": "c", "name": "3-oxo-cis-vacc-11-enoyl-[acyl-carrier protein]", "id": "3ocvac11eACP_c"}, {"formula": "C23H41N2O9PRS", "notes": {"original_bigg_ids": ["3oddecACP[c]"]}, "compartment": "c", "name": "3-Oxododecanoyl-[acyl-carrier protein]", "id": "3oddecACP_c"}, {"formula": "C21H37N2O9PRS", "notes": {"original_bigg_ids": ["3odecACP[c]"]}, "compartment": "c", "name": "3-Oxodecanoyl-[acyl-carrier protein]", "id": "3odecACP_c"}, {"formula": "C17H29N2O9PRS", "notes": {"original_bigg_ids": ["3ohexACP[c]"]}, "compartment": "c", "name": "3-Oxohexanoyl-[acyl-carrier protein]", "id": "3ohexACP_c"}, {"formula": "C25H45N2O9PRS", "notes": {"original_bigg_ids": ["3omrsACP[c]"]}, "compartment": "c", "name": "3-Oxotetradecanoyl-[acyl-carrier protein]", "id": "3omrsACP_c"}, {"formula": "C19H33N2O9PRS", "notes": {"original_bigg_ids": ["3ooctACP[c]"]}, "compartment": "c", "name": "3-Oxooctanoyl-[acyl-carrier protein]", "id": "3ooctACP_c"}, {"formula": "C29H53N2O9PRS", "notes": {"original_bigg_ids": ["3ooctdACP[c]"]}, "compartment": "c", "name": "3-Oxooctadecanoyl-[acyl-carrier protein]", "id": "3ooctdACP_c"}, {"formula": "C27H49N2O9PRS", "notes": {"original_bigg_ids": ["3opalmACP[c]"]}, "compartment": "c", "name": "3-Oxohexadecanoyl-[acyl-carrier protein]", "id": "3opalmACP_c"}, {"formula": "C3H4O7P", "notes": {"original_bigg_ids": ["3pg[c]"]}, "compartment": "c", "name": "3-Phospho-D-glycerate", "id": "3pg_c"}, {"formula": "C3H2O7P", "notes": {"original_bigg_ids": ["3php[c]"]}, "compartment": "c", "name": "3-Phosphohydroxypyruvate", "id": "3php_c"}, {"formula": "C10H9O10P", "notes": {"original_bigg_ids": ["3psme[c]"]}, "compartment": "c", "name": "5-O-(1-Carboxyvinyl)-3-phosphoshikimate", "id": "3psme_c"}, {"formula": "C3H5NO4S", "notes": {"original_bigg_ids": ["3sala[c]"]}, "compartment": "c", "name": "3-Sulfino-L-alanine", "id": "3sala_c"}, {"formula": "C4H9NO2", "notes": {"original_bigg_ids": ["4abut[c]"]}, "compartment": "c", "name": "4-Aminobutanoate", "id": "4abut_c"}, {"formula": "C4H10NO", "notes": {"original_bigg_ids": ["4abutn[c]"]}, "compartment": "c", "name": "4-Aminobutanal", "id": "4abutn_c"}, {"formula": "C7H6NO2", "notes": {"original_bigg_ids": ["4abz[c]"]}, "compartment": "c", "name": "4-Aminobenzoate", "id": "4abz_c"}, {"formula": "C10H10NO5", "notes": {"original_bigg_ids": ["4adcho[c]"]}, "compartment": "c", "name": "4-amino-4-deoxychorismate", "id": "4adcho_c"}, {"formula": "C6H9N3O", "notes": {"original_bigg_ids": ["4ahmmp[c]"]}, "compartment": "c", "name": "4-Amino-5-hydroxymethyl-2-methylpyrimidine", "id": "4ahmmp_c"}, {"formula": "C6H8N3O4P", "notes": {"original_bigg_ids": ["4ampm[c]"]}, "compartment": "c", "name": "4-Amino-2-methyl-5-phosphomethylpyrimidine", "id": "4ampm_c"}, {"formula": "C14H23N3O14P2", "notes": {"original_bigg_ids": ["4c2me[c]"]}, "compartment": "c", "name": "4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol", "id": "4c2me_c"}, {"formula": "C5H4O6", "notes": {"original_bigg_ids": ["4h2oglt[c]"]}, "compartment": "c", "name": "4 Hydroxy 2 oxoglutarate C5H4O6", "id": "4h2oglt_c"}, {"formula": "C4H9NO4", "notes": {"original_bigg_ids": ["4hthr[c]"]}, "compartment": "c", "name": "4-Hydroxy-L-threonine", "id": "4hthr_c"}, {"formula": "C6H7N2O3", "notes": {"original_bigg_ids": ["4izp[c]"]}, "compartment": "c", "name": "4-Imidazolone-5-propanoate", "id": "4izp_c"}, {"formula": "C6H9NOS", "notes": {"original_bigg_ids": ["4mhetz[c]"]}, "compartment": "c", "name": "4-Methyl-5-(2-hydroxyethyl)-thiazole", "id": "4mhetz_c"}, {"formula": "C6H9O3", "notes": {"original_bigg_ids": ["4mop[c]"]}, "compartment": "c", "name": "4-Methyl-2-oxopentanoate", "id": "4mop_c"}, {"formula": "C6H8NO4PS", "notes": {"original_bigg_ids": ["4mpetz[c]"]}, "compartment": "c", "name": "4-Methyl-5-(2-phosphoethyl)-thiazole", "id": "4mpetz_c"}, {"formula": "C4H6NO7P", "notes": {"original_bigg_ids": ["4pasp[c]"]}, "compartment": "c", "name": "4-Phospho-L-aspartate", "id": "4pasp_c"}, {"formula": "C9H15NO8P", "notes": {"original_bigg_ids": ["4ppan[c]"]}, "compartment": "c", "name": "D-4'-Phosphopantothenate", "id": "4ppan_c"}, {"formula": "C12H20N2O9PS", "notes": {"original_bigg_ids": ["4ppcys[c]"]}, "compartment": "c", "name": "N-((R)-4-Phosphopantothenoyl)-L-cysteine", "id": "4ppcys_c"}, {"formula": "C9H16N4O6", "notes": {"original_bigg_ids": ["4r5au[c]"]}, "compartment": "c", "name": "4-(1-D-Ribitylamino)-5-aminouracil", "id": "4r5au_c"}, {"formula": "C4H6N2O2", "notes": {"original_bigg_ids": ["56dura[c]"]}, "compartment": "c", "name": "5,6-dihydrouracil", "id": "56dura_c"}, {"formula": "C9H11N3O9P", "notes": {"original_bigg_ids": ["5aizc[c]"]}, "compartment": "c", "name": "5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate", "id": "5aizc_c"}, {"formula": "C5H9NO3", "notes": {"original_bigg_ids": ["5aop[c]"]}, "compartment": "c", "name": "5-Amino-4-oxopentanoate", "id": "5aop_c"}, {"formula": "C9H15N4O9P", "notes": {"original_bigg_ids": ["5aprbu[c]"]}, "compartment": "c", "name": "5-Amino-6-(5'-phosphoribitylamino)uracil", "id": "5aprbu_c"}, {"formula": "C9H13N4O9P", "notes": {"original_bigg_ids": ["5apru[c]"]}, "compartment": "c", "name": "5-Amino-6-(5'-phosphoribosylamino)uracil", "id": "5apru_c"}, {"formula": "C6H6O7", "notes": {"original_bigg_ids": ["5dh4dglc[c]"]}, "compartment": "c", "name": "5-Dehydro-4-deoxy-D-glucarate", "id": "5dh4dglc_c"}, {"formula": "C7H6N2O", "notes": {"original_bigg_ids": ["5hbzid[c]"]}, "compartment": "c", "name": "5-hydroxybenzimidazole", "id": "5hbzid_c"}, {"formula": "C11H15N5O3S", "notes": {"original_bigg_ids": ["5mta[c]"]}, "compartment": "c", "name": "5-Methylthioadenosine", "id": "5mta_c"}, {"formula": "C20H24N7O6", "notes": {"original_bigg_ids": ["5mthf[c]"]}, "compartment": "c", "name": "5-Methyltetrahydrofolate", "id": "5mthf_c"}, {"formula": "C6H12O4S", "notes": {"original_bigg_ids": ["5mtr[c]"]}, "compartment": "c", "name": "5-Methylthio-D-ribose", "id": "5mtr_c"}, {"formula": "C14H17N2O7P", "notes": {"original_bigg_ids": ["5prdmbz[c]"]}, "compartment": "c", "name": "N1-(5-Phospho-alpha-D-ribosyl)-5,6-dimethylbenzimidazole", "id": "5prdmbz_c"}, {"formula": "C7H8N5O8P2", "notes": {"original_bigg_ids": ["6hmhptpp[c]"]}, "compartment": "c", "name": "6-hydroxymethyl-dihydropterin pyrophosphate", "id": "6hmhptpp_c"}, {"formula": "C6H10O10P", "notes": {"original_bigg_ids": ["6pgc[c]"]}, "compartment": "c", "name": "6-Phospho-D-gluconate", "id": "6pgc_c"}, {"formula": "C11H21N2O7PRS", "notes": {"original_bigg_ids": ["ACP[c]"]}, "compartment": "c", "name": "Acyl carrier protein", "id": "ACP_c"}, {"formula": "C6H9NO5", "notes": {"original_bigg_ids": ["Nforglu[c]"]}, "compartment": "c", "name": "N-Formyl-L-glutamate", "id": "Nforglu_c"}, {"formula": "C25H36N7O18P3S", "notes": {"original_bigg_ids": ["aacoa[c]"]}, "compartment": "c", "name": "Acetoacetyl-CoA", "id": "aacoa_c"}, {"formula": "C5H12O5", "notes": {"original_bigg_ids": ["abt[c]"]}, "compartment": "c", "name": "L Arabinitol C5H12O5", "id": "abt_c"}, {"formula": "C2H3O2", "notes": {"original_bigg_ids": ["ac[c]"]}, "compartment": "c", "name": "Acetate", "id": "ac_c"}, {"formula": "C13H23N2O8PRS", "notes": {"original_bigg_ids": ["acACP[c]"]}, "compartment": "c", "name": "Acetyl-ACP", "id": "acACP_c"}, {"formula": "C2H4O", "notes": {"original_bigg_ids": ["acald[c]"]}, "compartment": "c", "name": "Acetaldehyde", "id": "acald_c"}, {"formula": "C23H34N7O17P3S", "notes": {"original_bigg_ids": ["accoa[c]"]}, "compartment": "c", "name": "Acetyl-CoA", "id": "accoa_c"}, {"formula": "C7H9NO8P", "notes": {"original_bigg_ids": ["acg5p[c]"]}, "compartment": "c", "name": "N-Acetyl-L-glutamyl 5-phosphate", "id": "acg5p_c"}, {"formula": "C7H10NO4", "notes": {"original_bigg_ids": ["acg5sa[c]"]}, "compartment": "c", "name": "N-Acetyl-L-glutamate 5-semialdehyde", "id": "acg5sa_c"}, {"formula": "C8H14NO9P", "notes": {"original_bigg_ids": ["acgam1p[c]"]}, "compartment": "c", "name": "N-Acetyl-D-glucosamine 1-phosphate", "id": "acgam1p_c"}, {"formula": "C7H9NO5", "notes": {"original_bigg_ids": ["acglu[c]"]}, "compartment": "c", "name": "N-Acetyl-L-glutamate", "id": "acglu_c"}, {"formula": "C6H11NO4", "notes": {"original_bigg_ids": ["achms[c]"]}, "compartment": "c", "name": "O Acetyl L homoserine C6H11NO4", "id": "achms_c"}, {"formula": "C11H18NO8", "notes": {"original_bigg_ids": ["acmam[c]"]}, "compartment": "c", "name": "N-Acetyl-D-muramoate", "id": "acmam_c"}, {"formula": "C14H23N2O9", "notes": {"original_bigg_ids": ["acmama[c]"]}, "compartment": "c", "name": "N-Acetyl-D-muramoyl-L-alanine", "id": "acmama_c"}, {"formula": "C8H15NO6", "notes": {"original_bigg_ids": ["acmana[c]"]}, "compartment": "c", "name": "N-Acetyl-D-mannosamine", "id": "acmana_c"}, {"formula": "C6H3O6", "notes": {"original_bigg_ids": ["acon-C[c]"]}, "compartment": "c", "name": "Cis-Aconitate", "id": "acon_C_c"}, {"formula": "C7H14N2O3", "notes": {"original_bigg_ids": ["acorn[c]"]}, "compartment": "c", "name": "N2-Acetyl-L-ornithine", 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"N6-(1,2-Dicarboxyethyl)-AMP", "id": "dcamp_c"}, {"formula": "C9H12N3O10P2", "notes": {"original_bigg_ids": ["dcdp[c]"]}, "compartment": "c", "name": "DCDP", "id": "dcdp_c"}, {"formula": "C9H12N3O7P", "notes": {"original_bigg_ids": ["dcmp[c]"]}, "compartment": "c", "name": "DCMP", "id": "dcmp_c"}, {"formula": "C9H12N3O13P3", "notes": {"original_bigg_ids": ["dctp[c]"]}, "compartment": "c", "name": "DCTP", "id": "dctp_c"}, {"formula": "C9H13N3O4", "notes": {"original_bigg_ids": ["dcyt[c]"]}, "compartment": "c", "name": "Deoxycytidine", "id": "dcyt_c"}, {"formula": "C23H43N2O8PRS", "notes": {"original_bigg_ids": ["ddcaACP[c]"]}, "compartment": "c", "name": "Dodecanoyl-ACP (n-C12:0ACP)", "id": "ddcaACP_c"}, {"formula": "C10H12N5O10P2", "notes": {"original_bigg_ids": ["dgdp[c]"]}, "compartment": "c", "name": "DGDP", "id": "dgdp_c"}, {"formula": "C10H12N5O7P", "notes": {"original_bigg_ids": ["dgmp[c]"]}, "compartment": "c", "name": "DGMP", "id": "dgmp_c"}, {"formula": "C10H13N5O4", "notes": {"original_bigg_ids": ["dgsn[c]"]}, "compartment": "c", "name": "Deoxyguanosine", "id": "dgsn_c"}, {"formula": "C10H12N5O13P3", "notes": {"original_bigg_ids": ["dgtp[c]"]}, "compartment": "c", "name": "DGTP", "id": "dgtp_c"}, {"formula": "C3H6O3", "notes": {"original_bigg_ids": ["dha[c]"]}, "compartment": "c", "name": "Dihydroxyacetone", "id": "dha_c"}, {"formula": "C3H5O6P", "notes": {"original_bigg_ids": ["dhap[c]"]}, "compartment": "c", "name": "Dihydroxyacetone phosphate", "id": "dhap_c"}, {"formula": "C19H19N7O6", "notes": {"original_bigg_ids": ["dhf[c]"]}, "compartment": "c", "name": "7,8-Dihydrofolate", "id": "dhf_c"}, {"formula": "H2S2X", "notes": {"original_bigg_ids": ["dhlpro[c]"]}, "compartment": "c", "name": "Dihydrolipolprotein H2S2X", "id": "dhlpro_c"}, {"formula": "C11H7O4", "notes": {"original_bigg_ids": ["dhna[c]"]}, "compartment": "c", "name": "1,4-Dihydroxy-2-naphthoate", "id": "dhna_c"}, {"formula": "C9H13N5O4", "notes": {"original_bigg_ids": ["dhnpt[c]"]}, 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"id": "dmbzid_c"}, {"formula": "C13H18N4O6", "notes": {"original_bigg_ids": ["dmlz[c]"]}, "compartment": "c", "name": "6,7-Dimethyl-8-(1-D-ribityl)lumazine", "id": "dmlz_c"}, {"formula": "C5H9O7P2", "notes": {"original_bigg_ids": ["dmpp[c]"]}, "compartment": "c", "name": "Dimethylallyl diphosphate", "id": "dmpp_c"}, {"formula": "C21H24N6O15P2", "notes": {"original_bigg_ids": ["dnad[c]"]}, "compartment": "c", "name": "Deamino-NAD+", "id": "dnad_c"}, {"formula": "C21H33N7O13P2S", "notes": {"original_bigg_ids": ["dpcoa[c]"]}, "compartment": "c", "name": "Dephospho-CoA", "id": "dpcoa_c"}, {"formula": "C42H41N4O16", "notes": {"original_bigg_ids": ["dscl[c]"]}, "compartment": "c", "name": "Dihydrosirohydrochlorin", "id": "dscl_c"}, {"formula": "C10H13N2O11P2", "notes": {"original_bigg_ids": ["dtdp[c]"]}, "compartment": "c", "name": "DTDP", "id": "dtdp_c"}, {"formula": "C16H22N2O15P2", "notes": {"original_bigg_ids": ["dtdp4d6dg[c]"]}, "compartment": "c", "name": "DTDP-4-dehydro-6-deoxy-D-glucose", "id": "dtdp4d6dg_c"}, {"formula": "C16H22N2O15P2", "notes": {"original_bigg_ids": ["dtdp4d6dm[c]"]}, "compartment": "c", "name": "DTDP-4-dehydro-6-deoxy-L-mannose", "id": "dtdp4d6dm_c"}, {"formula": "C16H24N2O16P2", "notes": {"original_bigg_ids": ["dtdpglu[c]"]}, "compartment": "c", "name": "DTDPglucose", "id": "dtdpglu_c"}, {"formula": "C16H24N2O15P2", "notes": {"original_bigg_ids": ["dtdprmn[c]"]}, "compartment": "c", "name": "DTDP-L-rhamnose", "id": "dtdprmn_c"}, {"formula": "C10H13N2O8P", "notes": {"original_bigg_ids": ["dtmp[c]"]}, "compartment": "c", "name": "DTMP", "id": "dtmp_c"}, {"formula": "C10H13N2O14P3", "notes": {"original_bigg_ids": ["dttp[c]"]}, "compartment": "c", "name": "DTTP", "id": "dttp_c"}, {"formula": "C9H11N2O11P2", "notes": {"original_bigg_ids": ["dudp[c]"]}, "compartment": "c", "name": "DUDP", "id": "dudp_c"}, {"formula": "C9H11N2O8P", "notes": {"original_bigg_ids": ["dump[c]"]}, "compartment": "c", "name": "DUMP", "id": "dump_c"}, {"formula": "C9H12N2O5", "notes": {"original_bigg_ids": ["duri[c]"]}, "compartment": "c", "name": "Deoxyuridine", "id": "duri_c"}, {"formula": "C9H11N2O14P3", "notes": {"original_bigg_ids": ["dutp[c]"]}, "compartment": "c", "name": "DUTP", "id": "dutp_c"}, {"formula": "C5H9O7P", "notes": {"original_bigg_ids": ["dxyl5p[c]"]}, "compartment": "c", "name": "1-deoxy-D-xylulose 5-phosphate", "id": "dxyl5p_c"}, {"formula": "C4H7O7P", "notes": {"original_bigg_ids": ["e4p[c]"]}, "compartment": "c", "name": "D-Erythrose 4-phosphate", "id": "e4p_c"}, {"formula": "C6H9N2O6P", "notes": {"original_bigg_ids": ["eig3p[c]"]}, "compartment": "c", "name": "D-erythro-1-(Imidazol-4-yl)glycerol 3-phosphate", "id": "eig3p_c"}, {"formula": "C2H8NO", "notes": {"original_bigg_ids": ["etha[c]"]}, "compartment": "c", "name": "Ethanolamine", "id": "etha_c"}, {"formula": "C2H6O", "notes": {"original_bigg_ids": ["etoh[c]"]}, "compartment": "c", "name": "Ethanol", "id": "etoh_c"}, {"formula": "C6H11O9P", "notes": {"original_bigg_ids": ["f1p[c]"]}, "compartment": "c", "name": "D-Fructose 1-phosphate", "id": "f1p_c"}, {"formula": "C6H11O9P", "notes": {"original_bigg_ids": ["f6p[c]"]}, "compartment": "c", "name": "D-Fructose 6-phosphate", "id": "f6p_c"}, {"formula": "C27H31N9O15P2", "notes": {"original_bigg_ids": ["fad[c]"]}, "compartment": "c", "name": "Flavin adenine dinucleotide oxidized", "id": "fad_c"}, {"formula": "C6H10O12P2", "notes": {"original_bigg_ids": ["fdp[c]"]}, "compartment": "c", "name": "D-Fructose 1,6-bisphosphate", "id": "fdp_c"}, {"formula": "Fe8S8X", "notes": {"original_bigg_ids": ["fdxo-4:2[c]"]}, "compartment": "c", "name": "Ferredoxin (oxidized form 4:2)", "id": "fdxo_4_2_c"}, {"formula": "Fe8S8X", "notes": {"original_bigg_ids": ["fdxr-4:2[c]"]}, "compartment": "c", "name": "Ferredoxin (reduced form 4:2)", "id": "fdxr_4_2_c"}, {"formula": "Fe", "notes": {"original_bigg_ids": ["fe2[c]"]}, "compartment": "c", "name": "Fe2+", "id": "fe2_c"}, {"formula": "C8H13N2O9P", "notes": {"original_bigg_ids": ["fgam[c]"]}, "compartment": "c", "name": "N2-Formyl-N1-(5-phospho-D-ribosyl)glycinamide", "id": "fgam_c"}, {"formula": "C17H19N4O9P", "notes": {"original_bigg_ids": ["fmn[c]"]}, "compartment": "c", "name": "FMN", "id": "fmn_c"}, {"formula": "C19H18N7O6", "notes": {"original_bigg_ids": ["fol[c]"]}, "compartment": "c", "name": "Folate", "id": "fol_c"}, {"formula": "CH1O2", "notes": {"original_bigg_ids": ["for[c]"]}, "compartment": "c", "name": "Formate", "id": "for_c"}, {"formula": "C6H8N2O4", "notes": {"original_bigg_ids": ["forglu[c]"]}, "compartment": "c", "name": "N-Formimidoyl-L-glutamate", "id": "forglu_c"}, {"formula": "C8H15N3O8P", "notes": {"original_bigg_ids": ["fpram[c]"]}, "compartment": "c", "name": "2-(Formamido)-N1-(5-phospho-D-ribosyl)acetamidine", "id": "fpram_c"}, {"formula": "C10H13N4O9P", "notes": {"original_bigg_ids": ["fprica[c]"]}, "compartment": "c", "name": "5-Formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide", "id": "fprica_c"}, {"formula": "C15H25O7P2", "notes": {"original_bigg_ids": ["frdp[c]"]}, "compartment": "c", "name": "Farnesyl diphosphate", "id": "frdp_c"}, {"formula": "CH3NO", "notes": {"original_bigg_ids": ["frmd[c]"]}, "compartment": "c", "name": "Formamide", "id": "frmd_c"}, {"formula": "C6H12O6", "notes": {"original_bigg_ids": ["fru[c]"]}, "compartment": "c", "name": "D-Fructose", "id": "fru_c"}, {"formula": "C4H2O4", "notes": {"original_bigg_ids": ["fum[c]"]}, "compartment": "c", "name": "Fumarate", "id": "fum_c"}, {"formula": "C6H11O9P", "notes": {"original_bigg_ids": ["g1p[c]"]}, "compartment": "c", "name": "D-Glucose 1-phosphate", "id": "g1p_c"}, {"formula": "C3H5O6P", "notes": {"original_bigg_ids": ["g3p[c]"]}, "compartment": "c", "name": "Glyceraldehyde 3-phosphate", "id": "g3p_c"}, {"formula": "C8H20NO6P", "notes": {"original_bigg_ids": ["g3pc[c]"]}, "compartment": "c", "name": "Sn-Glycero-3-phosphocholine", "id": "g3pc_c"}, {"formula": "C5H14NO6P", "notes": 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["ggdp[c]"]}, "compartment": "c", "name": "Geranylgeranyl diphosphate C20H33O7P2", "id": "ggdp_c"}, {"formula": "C6H12O6", "notes": {"original_bigg_ids": ["glc-D[c]"]}, "compartment": "c", "name": "D-Glucose", "id": "glc__D_c"}, {"formula": "C6H11O7", "notes": {"original_bigg_ids": ["glcn[c]"]}, "compartment": "c", "name": "D-Gluconate", "id": "glcn_c"}, {"formula": "C6H8O8", "notes": {"original_bigg_ids": ["glcr[c]"]}, "compartment": "c", "name": "D-Glucarate", "id": "glcr_c"}, {"formula": "C6H9O7", "notes": {"original_bigg_ids": ["glcur[c]"]}, "compartment": "c", "name": "D-Glucuronate", "id": "glcur_c"}, {"formula": "C5H10N2O3", "notes": {"original_bigg_ids": ["gln-L[c]"]}, "compartment": "c", "name": "L-Glutamine", "id": "gln__L_c"}, {"formula": "C5H8NO4", "notes": {"original_bigg_ids": ["glu-D[c]"]}, "compartment": "c", "name": "D-Glutamate", "id": "glu__D_c"}, {"formula": "C5H8NO4", "notes": {"original_bigg_ids": ["glu-L[c]"]}, "compartment": "c", "name": "L-Glutamate", "id": 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"gua_c"}, {"formula": "H", "notes": {"original_bigg_ids": ["h[c]"]}, "compartment": "c", "name": "H+", "id": "h_c"}, {"formula": "H2", "notes": {"original_bigg_ids": ["h2[c]"]}, "compartment": "c", "name": "H2", "id": "h2_c"}, {"formula": "C5H9O8P2", "notes": {"original_bigg_ids": ["h2mb4p[c]"]}, "compartment": "c", "name": "1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate", "id": "h2mb4p_c"}, {"formula": "H2O", "notes": {"original_bigg_ids": ["h2o[c]"]}, "compartment": "c", "name": "H2O", "id": "h2o_c"}, {"formula": "H2O2", "notes": {"original_bigg_ids": ["h2o2[c]"]}, "compartment": "c", "name": "Hydrogen peroxide", "id": "h2o2_c"}, {"formula": "H2S", "notes": {"original_bigg_ids": ["h2s[c]"]}, "compartment": "c", "name": "Hydrogen sulfide", "id": "h2s_c"}, {"formula": "H3NO", "notes": {"original_bigg_ids": ["ham[c]"]}, "compartment": "c", "name": "Hydroxylamine", "id": "ham_c"}, {"formula": "C7H7O7", "notes": {"original_bigg_ids": ["hcit[c]"]}, "compartment": "c", "name": "2 Hydroxybutane 1 2 4 tricarboxylate C7H7O7", "id": "hcit_c"}, {"formula": "CHO3", "notes": {"original_bigg_ids": ["hco3[c]"]}, "compartment": "c", "name": "Bicarbonate", "id": "hco3_c"}, {"formula": "C4H9NO2S", "notes": {"original_bigg_ids": ["hcys-L[c]"]}, "compartment": "c", "name": "L-Homocysteine", "id": "hcys__L_c"}, {"formula": "C16H31O2", "notes": {"original_bigg_ids": ["hdca[c]"]}, "compartment": "c", "name": "Hexadecanoate (n-C16:0)", "id": "hdca_c"}, {"formula": "C27H49N2O8PRS", "notes": {"original_bigg_ids": ["hdeACP[c]"]}, "compartment": "c", "name": "Cis-hexadec-9-enoyl-[acyl-carrier protein] (n-C16:1)", "id": "hdeACP_c"}, {"formula": "C17H31N2O8PRS", "notes": {"original_bigg_ids": ["hexACP[c]"]}, "compartment": "c", "name": "Hexanoyl-ACP (n-C6:0ACP)", "id": "hexACP_c"}, {"formula": "C45H54N4O14", "notes": {"original_bigg_ids": ["hgbyr[c]"]}, "compartment": "c", "name": "Hydrogenobyrinate", "id": "hgbyr_c"}, {"formula": "C6H9N3O2", "notes": {"original_bigg_ids": ["his-L[c]"]}, "compartment": "c", "name": "L-Histidine", "id": "his__L_c"}, {"formula": "C6H11N3O4P", "notes": {"original_bigg_ids": ["hisp[c]"]}, "compartment": "c", "name": "L-Histidinol phosphate", "id": "hisp_c"}, {"formula": "C6H12N3O", "notes": {"original_bigg_ids": ["histd[c]"]}, "compartment": "c", "name": "L-Histidinol", "id": "histd_c"}, {"formula": "C40H38N4O17", "notes": {"original_bigg_ids": ["hmbil[c]"]}, "compartment": "c", "name": "Hydroxymethylbilane", "id": "hmbil_c"}, {"formula": "C4H9NO3", "notes": {"original_bigg_ids": ["hom-L[c]"]}, "compartment": "c", "name": "L-Homoserine", "id": "hom__L_c"}, {"formula": "C5H4N4O", "notes": {"original_bigg_ids": ["hxan[c]"]}, "compartment": "c", "name": "Hypoxanthine", "id": "hxan_c"}, {"formula": "C4H3NO4", "notes": {"original_bigg_ids": ["iasp[c]"]}, "compartment": "c", "name": "Iminoaspartate", "id": "iasp_c"}, {"formula": "C6H5O7", "notes": {"original_bigg_ids": ["icit[c]"]}, "compartment": "c", "name": "Isocitrate", "id": "icit_c"}, {"formula": "C10H11N4O11P2", "notes": {"original_bigg_ids": ["idp[c]"]}, "compartment": "c", "name": "IDP", "id": "idp_c"}, {"formula": "C6H13NO2", "notes": {"original_bigg_ids": ["ile-L[c]"]}, "compartment": "c", "name": "L-Isoleucine", "id": "ile__L_c"}, {"formula": "C6H12NOR", "notes": {"original_bigg_ids": ["iletrna[c]"]}, "compartment": "c", "name": "L-Isoleucyl-tRNA(Ile)", "id": "iletrna_c"}, {"formula": "C6H7N2O5P", "notes": {"original_bigg_ids": ["imacp[c]"]}, "compartment": "c", "name": "3-(Imidazol-4-yl)-2-oxopropyl phosphate", "id": "imacp_c"}, {"formula": "C10H11N4O8P", "notes": {"original_bigg_ids": ["imp[c]"]}, "compartment": "c", "name": "IMP", "id": "imp_c"}, {"formula": "C8H7N", "notes": {"original_bigg_ids": ["indole[c]"]}, "compartment": "c", "name": "Indole", "id": "indole_c"}, {"formula": "C10H12N4O5", "notes": {"original_bigg_ids": ["ins[c]"]}, "compartment": "c", "name": "Inosine", "id": "ins_c"}, {"formula": "C5H9O7P2", "notes": {"original_bigg_ids": ["ipdp[c]"]}, "compartment": "c", "name": "Isopentenyl diphosphate", "id": "ipdp_c"}, {"formula": "C10H11N4O14P3", "notes": {"original_bigg_ids": ["itp[c]"]}, "compartment": "c", "name": "ITP", "id": "itp_c"}, {"formula": "K", "notes": {"original_bigg_ids": ["k[c]"]}, "compartment": "c", "name": "Potassium", "id": "k_c"}, {"formula": "C3H5O3", "notes": {"original_bigg_ids": ["lac-D[c]"]}, "compartment": "c", "name": "D-Lactate", "id": "lac__D_c"}, {"formula": "C3H6O2", "notes": {"original_bigg_ids": ["lald-L[c]"]}, "compartment": "c", "name": "L-Lactaldehyde", "id": "lald__L_c"}, {"formula": "C6H13NO2", "notes": {"original_bigg_ids": ["leu-L[c]"]}, "compartment": "c", "name": "L-Leucine", "id": "leu__L_c"}, {"formula": "C6H12NOR", "notes": {"original_bigg_ids": ["leutrna[c]"]}, "compartment": "c", "name": "L-Leucyl-tRNA(Leu)", "id": "leutrna_c"}, {"formula": "S2X", "notes": {"original_bigg_ids": ["lpro[c]"]}, "compartment": "c", "name": "Lipoylprotein S2X", "id": "lpro_c"}, {"formula": "C6H15N2O2", "notes": {"original_bigg_ids": ["lys-L[c]"]}, "compartment": "c", "name": "L-Lysine", "id": "lys__L_c"}, {"formula": "C4H4O5", "notes": {"original_bigg_ids": ["mal-L[c]"]}, "compartment": "c", "name": "L-Malate", "id": "mal__L_c"}, {"formula": "C14H22N2O10PRS", "notes": {"original_bigg_ids": ["malACP[c]"]}, "compartment": "c", "name": "Malonyl-[acyl-carrier protein]", "id": "malACP_c"}, {"formula": "C24H33N7O19P3S", "notes": {"original_bigg_ids": ["malcoa[c]"]}, "compartment": "c", "name": "Malonyl-CoA", "id": "malcoa_c"}, {"formula": "C12H22O11", "notes": {"original_bigg_ids": ["malt[c]"]}, "compartment": "c", "name": "Maltose", "id": "malt_c"}, {"formula": "C36H62O31", "notes": {"original_bigg_ids": ["malthx[c]"]}, "compartment": "c", "name": "Maltohexaose", "id": "malthx_c"}, {"formula": "C18H32O16", "notes": {"original_bigg_ids": ["malttr[c]"]}, "compartment": "c", "name": "Maltotriose", "id": "malttr_c"}, {"formula": "C6H11O9P", "notes": {"original_bigg_ids": ["man1p[c]"]}, "compartment": "c", "name": "D-Mannose 1-phosphate", "id": "man1p_c"}, {"formula": "C6H11O9P", "notes": {"original_bigg_ids": ["man6p[c]"]}, "compartment": "c", "name": "D-Mannose 6-phosphate", "id": "man6p_c"}, {"formula": "C5H8O4", "notes": {"original_bigg_ids": ["mdhdhf[c]"]}, "compartment": "c", "name": "(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one", "id": "mdhdhf_c"}, {"formula": "C20H3CoN4R21", "notes": {"original_bigg_ids": ["mecfsp[c]"]}, "compartment": "c", "name": "Methylcorrinoid iron sulfur protein", "id": "mecfsp_c"}, {"formula": "C5H11NO2S", "notes": {"original_bigg_ids": ["met-L[c]"]}, "compartment": "c", "name": "L-Methionine", "id": "met__L_c"}, {"formula": "C20H20N7O6", "notes": {"original_bigg_ids": ["methf[c]"]}, "compartment": "c", "name": "5,10-Methenyltetrahydrofolate", "id": "methf_c"}, {"formula": "C5H10NOSR", "notes": {"original_bigg_ids": ["mettrna[c]"]}, "compartment": "c", "name": "L-Methionyl-tRNA (Met)", "id": "mettrna_c"}, {"formula": "Mg", "notes": {"original_bigg_ids": ["mg2[c]"]}, "compartment": "c", "name": "Magnesium", "id": "mg2_c"}, {"formula": "C20H21N7O6", "notes": {"original_bigg_ids": ["mlthf[c]"]}, "compartment": "c", "name": "5,10-Methylenetetrahydrofolate", "id": "mlthf_c"}, {"formula": "Mn", "notes": {"original_bigg_ids": ["mn2[c]"]}, "compartment": "c", "name": "Mn2+", "id": "mn2_c"}, {"formula": "MoO4", "notes": {"original_bigg_ids": ["mobd[c]"]}, "compartment": "c", "name": "Molybdate", "id": "mobd_c"}, {"formula": "C51H74O2", "notes": {"original_bigg_ids": ["mql8[c]"]}, "compartment": "c", "name": "Menaquinol 8", "id": "mql8_c"}, {"formula": "C51H72O2", "notes": {"original_bigg_ids": ["mqn8[c]"]}, "compartment": "c", "name": "Menaquinone 8", "id": "mqn8_c"}, {"formula": "C3H4O2", "notes": {"original_bigg_ids": ["mthgxl[c]"]}, "compartment": "c", "name": "Methylglyoxal", "id": "mthgxl_c"}, {"formula": "C5H10O5", "notes": {"original_bigg_ids": ["mththf[c]"]}, "compartment": "c", "name": "(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran", "id": "mththf_c"}, {"formula": "C25H47N2O8PRS", "notes": {"original_bigg_ids": ["myrsACP[c]"]}, "compartment": "c", "name": "Myristoyl-ACP (n-C14:0ACP)", "id": "myrsACP_c"}, {"formula": "N2", "notes": {"original_bigg_ids": ["n2[c]"]}, "compartment": "c", "name": "Nitrogen", "id": "n2_c"}, {"formula": "Na", "notes": {"original_bigg_ids": ["na1[c]"]}, "compartment": "c", "name": "Sodium", "id": "na1_c"}, {"formula": "C6H4NO2", "notes": {"original_bigg_ids": ["nac[c]"]}, "compartment": "c", "name": "Nicotinate", "id": "nac_c"}, {"formula": "C21H26N7O14P2", "notes": {"original_bigg_ids": ["nad[c]"]}, "compartment": "c", "name": "Nicotinamide adenine dinucleotide", "id": "nad_c"}, {"formula": "C21H27N7O14P2", "notes": {"original_bigg_ids": ["nadh[c]"]}, "compartment": "c", "name": "Nicotinamide adenine dinucleotide - reduced", "id": "nadh_c"}, {"formula": "C21H25N7O17P3", "notes": {"original_bigg_ids": ["nadp[c]"]}, "compartment": "c", "name": "Nicotinamide adenine dinucleotide phosphate", "id": "nadp_c"}, {"formula": "C21H26N7O17P3", "notes": {"original_bigg_ids": ["nadph[c]"]}, "compartment": "c", "name": "Nicotinamide adenine dinucleotide phosphate - reduced", "id": "nadph_c"}, {"formula": "C6H6N2O", "notes": {"original_bigg_ids": ["ncam[c]"]}, "compartment": "c", "name": "Nicotinamide", "id": "ncam_c"}, {"formula": "H4N", "notes": {"original_bigg_ids": ["nh4[c]"]}, "compartment": "c", "name": "Ammonium", "id": "nh4_c"}, {"formula": "Ni", "notes": {"original_bigg_ids": ["ni2[c]"]}, "compartment": "c", "name": "Nickel", "id": "ni2_c"}, {"formula": "C11H12NO9P", "notes": {"original_bigg_ids": ["nicrnt[c]"]}, "compartment": "c", "name": "Nicotinate D-ribonucleotide", "id": "nicrnt_c"}, {"formula": "NO2", "notes": {"original_bigg_ids": ["no2[c]"]}, "compartment": "c", "name": "Nitrite", "id": "no2_c"}, {"formula": "NO3", "notes": {"original_bigg_ids": ["no3[c]"]}, "compartment": "c", "name": "Nitrate", "id": "no3_c"}, {"formula": "O2", "notes": {"original_bigg_ids": ["o2[c]"]}, "compartment": "c", "name": "O2", "id": "o2_c"}, {"formula": "O2", "notes": {"original_bigg_ids": ["o2s[c]"]}, "compartment": "c", "name": "Superoxide anion", "id": "o2s_c"}, {"formula": "C4H2O5", "notes": {"original_bigg_ids": ["oaa[c]"]}, "compartment": "c", "name": "Oxaloacetate", "id": "oaa_c"}, {"formula": "C19H35N2O8PRS", "notes": {"original_bigg_ids": ["ocACP[c]"]}, "compartment": "c", "name": "Octanoyl-ACP (n-C8:0ACP)", "id": "ocACP_c"}, {"formula": "C18H35O2", "notes": {"original_bigg_ids": ["ocdca[c]"]}, "compartment": "c", "name": "Octadecanoate (n-C18:0)", "id": "ocdca_c"}, {"formula": "C29H55N2O8PRS", "notes": {"original_bigg_ids": ["ocdcaACP[c]"]}, "compartment": "c", "name": "Octadecanoyl-ACP (n-C18:0ACP)", "id": "ocdcaACP_c"}, {"formula": "C40H65O7P2", "notes": {"original_bigg_ids": ["octdp[c]"]}, "compartment": "c", "name": "All-trans-Octaprenyl diphosphate", "id": "octdp_c"}, {"formula": "C29H53N2O8PRS", "notes": {"original_bigg_ids": ["octeACP[c]"]}, "compartment": "c", "name": "Cis-octadec-11-enoyl-[acyl-carrier protein] (n-C18:1)", "id": "octeACP_c"}, {"formula": "C5H13N2O2", "notes": {"original_bigg_ids": ["orn[c]"]}, "compartment": "c", "name": "Ornithine", "id": "orn_c"}, {"formula": "C5H3N2O4", "notes": {"original_bigg_ids": ["orot[c]"]}, "compartment": "c", "name": "Orotate", "id": "orot_c"}, {"formula": "C10H10N2O11P", "notes": {"original_bigg_ids": ["orot5p[c]"]}, "compartment": "c", "name": "Orotidine 5'-phosphate", "id": "orot5p_c"}, {"formula": "C27H51O8P1", "notes": {"original_bigg_ids": ["pa120[c]"]}, "compartment": "c", "name": "1,2-didodecanoyl-sn-glycerol 3-phosphate", "id": "pa120_c"}, {"formula": "C31H59O8P1", "notes": {"original_bigg_ids": ["pa140[c]"]}, "compartment": "c", "name": "1,2-ditetradecanoyl-sn-glycerol 3-phosphate", "id": "pa140_c"}, {"formula": "C35H67O8P1", "notes": {"original_bigg_ids": ["pa160[c]"]}, "compartment": "c", "name": "1,2-dihexadecanoyl-sn-glycerol 3-phosphate", "id": "pa160_c"}, {"formula": "C35H63O8P1", "notes": {"original_bigg_ids": ["pa161[c]"]}, "compartment": "c", "name": "1,2-dihexadec-9-enoyl-sn-glycerol 3-phosphate", "id": "pa161_c"}, {"formula": "C39H75O8P1", "notes": {"original_bigg_ids": ["pa180[c]"]}, "compartment": "c", "name": "1,2-dioctadecanoyl-sn-glycerol 3-phosphate", "id": "pa180_c"}, {"formula": "C39H71O8P1", "notes": {"original_bigg_ids": ["pa181[c]"]}, "compartment": "c", "name": "1,2-dioctadec-11-enoyl-sn-glycerol 3-phosphate", "id": "pa181_c"}, {"formula": "C27H51N2O8PRS", "notes": {"original_bigg_ids": ["palmACP[c]"]}, "compartment": "c", "name": "Palmitoyl-ACP (n-C16:0ACP)", "id": "palmACP_c"}, {"formula": "C11H21N2O7PS", "notes": {"original_bigg_ids": ["pan4p[c]"]}, "compartment": "c", "name": "Pantetheine 4'-phosphate", "id": "pan4p_c"}, {"formula": "C6H11O4", "notes": {"original_bigg_ids": ["pant-R[c]"]}, "compartment": "c", "name": "(R)-Pantoate", "id": "pant__R_c"}, {"formula": "C10H11N5O10P2", "notes": {"original_bigg_ids": ["pap[c]"]}, "compartment": "c", "name": "Adenosine 3',5'-bisphosphate", "id": "pap_c"}, {"formula": "C8H10NO6P", "notes": {"original_bigg_ids": ["pdx5p[c]"]}, "compartment": "c", "name": "Pyridoxine 5'-phosphate", "id": "pdx5p_c"}, {"formula": "C29H58N1O8P1", "notes": {"original_bigg_ids": ["pe120[c]"]}, "compartment": "c", "name": "Phosphatidylethanolamine (didodecanoyl, n-C12:0)", "id": "pe120_c"}, {"formula": "C33H66N1O8P1", "notes": {"original_bigg_ids": ["pe140[c]"]}, "compartment": "c", "name": "Phosphatidylethanolamine (ditetradecanoyl, n-C14:0)", "id": "pe140_c"}, {"formula": "C37H74N1O8P1", "notes": {"original_bigg_ids": ["pe160[c]"]}, "compartment": "c", "name": "Phosphatidylethanolamine (dihexadecanoyl, n-C16:0)", "id": "pe160_c"}, {"formula": "C37H70N1O8P1", "notes": {"original_bigg_ids": ["pe161[c]"]}, "compartment": "c", "name": "Phosphatidylethanolamine (dihexadec-9enoyl, n-C16:1)", "id": "pe161_c"}, {"formula": "C41H82N1O8P1", "notes": {"original_bigg_ids": ["pe180[c]"]}, "compartment": "c", "name": "Phosphatidylethanolamine (dioctadecanoyl, n-C18:0)", "id": "pe180_c"}, {"formula": "C41H78N1O8P1", "notes": {"original_bigg_ids": ["pe181[c]"]}, "compartment": "c", "name": "Phosphatidylethanolamine (dioctadec-11-enoyl, n-C18:1)", "id": "pe181_c"}, {"formula": "C3H2O6P", "notes": {"original_bigg_ids": ["pep[c]"]}, "compartment": "c", "name": "Phosphoenolpyruvate", "id": "pep_c"}, {"formula": "C30H58O10P1", "notes": {"original_bigg_ids": ["pg120[c]"]}, "compartment": "c", "name": "Phosphatidylglycerol (didodecanoyl, n-C12:0)", "id": "pg120_c"}, {"formula": "C34H66O10P1", "notes": {"original_bigg_ids": ["pg140[c]"]}, "compartment": "c", "name": "Phosphatidylglycerol (ditetradecanoyl, n-C14:0)", "id": "pg140_c"}, {"formula": "C38H74O10P1", "notes": {"original_bigg_ids": ["pg160[c]"]}, "compartment": "c", "name": "Phosphatidylglycerol (dihexadecanoyl, n-C16:0)", "id": "pg160_c"}, {"formula": "C38H70O10P1", "notes": {"original_bigg_ids": ["pg161[c]"]}, "compartment": "c", "name": "Phosphatidylglycerol (dihexadec-9-enoyl, n-C16:1)", "id": "pg161_c"}, {"formula": "C42H82O10P1", "notes": {"original_bigg_ids": ["pg180[c]"]}, "compartment": "c", "name": "Phosphatidylglycerol (dioctadecanoyl, n-C18:0)", "id": "pg180_c"}, {"formula": "C42H78O10P1", "notes": {"original_bigg_ids": ["pg181[c]"]}, "compartment": "c", "name": "Phosphatidylglycerol (dioctadec-11-enoyl, n-C18:1)", "id": "pg181_c"}, {"formula": "C30H57O13P2", "notes": {"original_bigg_ids": ["pgp120[c]"]}, "compartment": "c", "name": "Phosphatidylglycerophosphate (didodecanoyl, n-C12:0)", "id": "pgp120_c"}, {"formula": "C34H65O13P2", "notes": {"original_bigg_ids": ["pgp140[c]"]}, "compartment": "c", "name": "Phosphatidylglycerophosphate (ditetradecanoyl, n-C14:0)", "id": "pgp140_c"}, {"formula": "C38H73O13P2", "notes": {"original_bigg_ids": ["pgp160[c]"]}, "compartment": "c", "name": "Phosphatidylglycerophosphate (dihexadecanoyl, n-C16:0)", "id": "pgp160_c"}, {"formula": "C38H69O13P2", "notes": {"original_bigg_ids": ["pgp161[c]"]}, "compartment": "c", "name": "Phosphatidylglycerophosphate (dihexadec-9-enoyl, n-C16:1)", "id": "pgp161_c"}, {"formula": "C42H81O13P2", "notes": {"original_bigg_ids": ["pgp180[c]"]}, "compartment": "c", "name": "Phosphatidylglycerophosphate (dioctadecanoyl, n-C18:0)", "id": "pgp180_c"}, {"formula": "C42H77O13P2", "notes": {"original_bigg_ids": ["pgp181[c]"]}, "compartment": "c", "name": "Phosphatidylglycerophosphate (dioctadec-11-enoyl, n-C18:1)", "id": "pgp181_c"}, {"formula": "C9H11NO2", "notes": {"original_bigg_ids": ["phe-L[c]"]}, "compartment": "c", "name": "L-Phenylalanine", "id": "phe__L_c"}, {"formula": "C9H10NOR", "notes": {"original_bigg_ids": ["phetrna[c]"]}, "compartment": "c", "name": "L-Phenylalanyl-tRNA(Phe)", "id": "phetrna_c"}, {"formula": "C4H8NO6P", "notes": {"original_bigg_ids": ["phom[c]"]}, "compartment": "c", "name": "O-Phospho-L-homoserine", "id": "phom_c"}, {"formula": "C9H7O3", "notes": {"original_bigg_ids": ["phpyr[c]"]}, "compartment": "c", "name": "Phenylpyruvate", "id": "phpyr_c"}, {"formula": "C4H8NO7P", "notes": {"original_bigg_ids": ["phthr[c]"]}, "compartment": "c", "name": "O-Phospho-4-hydroxy-L-threonine", "id": "phthr_c"}, {"formula": "HO4P", "notes": {"original_bigg_ids": ["pi[c]"]}, "compartment": "c", "name": "Phosphate", "id": "pi_c"}, {"formula": "C37H62N7O17P3S", "notes": {"original_bigg_ids": ["pmtcoa[c]"]}, "compartment": "c", "name": "Palmitoyl-CoA (n-C16:0CoA)", "id": "pmtcoa_c"}, {"formula": "C9H16NO5", "notes": {"original_bigg_ids": ["pnto-R[c]"]}, "compartment": "c", "name": "(R)-Pantothenate", "id": "pnto__R_c"}, {"formula": "C3H5O2", "notes": {"original_bigg_ids": ["ppa[c]"]}, "compartment": "c", "name": "Propionate (n-C3:0)", "id": "ppa_c"}, {"formula": "C3H5O5P", "notes": {"original_bigg_ids": ["ppap[c]"]}, "compartment": "c", "name": "Propanoyl phosphate", "id": "ppap_c"}, {"formula": "C10H13N2O4", "notes": {"original_bigg_ids": ["ppbng[c]"]}, "compartment": "c", "name": "Porphobilinogen", "id": "ppbng_c"}, {"formula": "C24H36N7O17P3S", "notes": {"original_bigg_ids": ["ppcoa[c]"]}, "compartment": "c", "name": "Propanoyl-CoA", "id": "ppcoa_c"}, {"formula": "C10H8O6", "notes": {"original_bigg_ids": ["pphn[c]"]}, "compartment": "c", "name": "Prephenate", "id": "pphn_c"}, {"formula": "HO7P2", "notes": {"original_bigg_ids": ["ppi[c]"]}, "compartment": "c", "name": "Diphosphate", "id": "ppi_c"}, {"formula": "C34H38N4O4", "notes": {"original_bigg_ids": ["pppg9[c]"]}, "compartment": "c", "name": "Protoporphyrinogen IX", "id": "pppg9_c"}, {"formula": "HO10P3", "notes": {"original_bigg_ids": ["pppi[c]"]}, "compartment": "c", "name": "Inorganic triphosphate", "id": "pppi_c"}, {"formula": "C5H11NO7P", "notes": {"original_bigg_ids": ["pram[c]"]}, "compartment": "c", "name": "5-Phospho-beta-D-ribosylamine", "id": "pram_c"}, {"formula": "C12H13NO9P", "notes": {"original_bigg_ids": ["pran[c]"]}, "compartment": "c", "name": "N-(5-Phospho-D-ribosyl)anthranilate", "id": "pran_c"}, {"formula": "C15H19N5O14P2", "notes": {"original_bigg_ids": ["prbamp[c]"]}, "compartment": "c", "name": "1-(5-Phosphoribosyl)-AMP", "id": "prbamp_c"}, {"formula": "C15H19N5O20P4", "notes": {"original_bigg_ids": ["prbatp[c]"]}, "compartment": "c", "name": "1-(5-Phosphoribosyl)-ATP", "id": "prbatp_c"}, {"formula": "C43H43N4O16", "notes": {"original_bigg_ids": ["pre3a[c]"]}, "compartment": "c", "name": "Precorrin 3 A", "id": "pre3a_c"}, {"formula": "C43H44N4O17", "notes": {"original_bigg_ids": ["pre3b[c]"]}, "compartment": "c", "name": "Precorrin 3B", "id": "pre3b_c"}, {"formula": "C44H44N4O17", "notes": {"original_bigg_ids": ["pre4[c]"]}, "compartment": "c", "name": "Precorrin 4", "id": "pre4_c"}, {"formula": "C45H46N4O17", "notes": {"original_bigg_ids": ["pre5[c]"]}, "compartment": "c", "name": "Precorrin 5", "id": "pre5_c"}, {"formula": "C44H47N4O16", "notes": {"original_bigg_ids": ["pre6a[c]"]}, "compartment": "c", "name": "Precorrin 6A", "id": "pre6a_c"}, {"formula": "C44H49N4O16", "notes": {"original_bigg_ids": ["pre6b[c]"]}, "compartment": "c", "name": "Precorrin 6B", "id": "pre6b_c"}, {"formula": "C45H53N4O14", "notes": {"original_bigg_ids": ["pre8[c]"]}, "compartment": "c", "name": "Precorrin 8", "id": "pre8_c"}, {"formula": "C15H21N5O15P2", "notes": {"original_bigg_ids": ["prfp[c]"]}, "compartment": "c", "name": "1-(5-Phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide", "id": "prfp_c"}, {"formula": "C15H21N5O15P2", "notes": {"original_bigg_ids": ["prlp[c]"]}, "compartment": "c", "name": "5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]-1-(5-phosphoribosyl)imidazole-4-carboxamide", "id": "prlp_c"}, {"formula": "C5H9NO2", "notes": {"original_bigg_ids": ["pro-L[c]"]}, "compartment": "c", "name": "L-Proline", "id": "pro__L_c"}, {"formula": "C5H8O14P3", "notes": {"original_bigg_ids": ["prpp[c]"]}, "compartment": "c", "name": "5-Phospho-alpha-D-ribose 1-diphosphate", "id": "prpp_c"}, {"formula": "C30H57N1O10P1", "notes": {"original_bigg_ids": ["ps120[c]"]}, "compartment": "c", "name": "Phosphatidylserine (didodecanoyl, n-C12:0)", "id": "ps120_c"}, {"formula": "C34H65N1O10P1", "notes": {"original_bigg_ids": ["ps140[c]"]}, "compartment": "c", "name": "Phosphatidylserine (ditetradecanoyl, n-C14:0)", "id": "ps140_c"}, {"formula": "C38H73N1O10P1", "notes": {"original_bigg_ids": ["ps160[c]"]}, "compartment": "c", "name": "Phosphatidylserine (dihexadecanoyl, n-C16:0)", "id": "ps160_c"}, {"formula": "C38H69N1O10P1", "notes": {"original_bigg_ids": ["ps161[c]"]}, "compartment": "c", "name": "Phosphatidylserine (dihexadec-9-enoyl, n-C16:1)", "id": "ps161_c"}, {"formula": "C42H81N1O10P1", "notes": {"original_bigg_ids": ["ps180[c]"]}, "compartment": "c", "name": "Phosphatidylserine (dioctadecanoyl, n-C18:0)", "id": "ps180_c"}, {"formula": "C42H77N1O10P1", "notes": {"original_bigg_ids": ["ps181[c]"]}, "compartment": "c", "name": "Phosphatidylserine (dioctadec-11-enoyl, n-C18:1)", "id": "ps181_c"}, {"formula": "C3H6NO6P", "notes": {"original_bigg_ids": ["pser-L[c]"]}, "compartment": "c", "name": "O-Phospho-L-serine", "id": "pser__L_c"}, {"formula": "C4H14N2", "notes": {"original_bigg_ids": ["ptrc[c]"]}, "compartment": "c", "name": "Putrescine", "id": "ptrc_c"}, {"formula": "C8H8NO6P", "notes": {"original_bigg_ids": ["pydx5p[c]"]}, "compartment": "c", "name": "Pyridoxal 5'-phosphate", "id": "pydx5p_c"}, {"formula": "C8H11NO3", "notes": {"original_bigg_ids": ["pydxn[c]"]}, "compartment": "c", "name": "Pyridoxine", "id": "pydxn_c"}, {"formula": "C3H3O3", "notes": {"original_bigg_ids": ["pyr[c]"]}, "compartment": "c", "name": "Pyruvate", "id": "pyr_c"}, {"formula": "C7H3NO4", "notes": {"original_bigg_ids": ["quln[c]"]}, "compartment": "c", "name": "Quinolinate", "id": "quln_c"}, {"formula": "C5H9O8P", "notes": {"original_bigg_ids": ["r1p[c]"]}, "compartment": "c", "name": "Alpha-D-Ribose 1-phosphate", "id": "r1p_c"}, {"formula": "C5H9O8P", "notes": {"original_bigg_ids": ["r5p[c]"]}, "compartment": "c", "name": "Alpha-D-Ribose 5-phosphate", "id": "r5p_c"}, {"formula": "C5H10O5", "notes": {"original_bigg_ids": ["rbl-L[c]"]}, "compartment": "c", "name": "L-Ribulose", "id": "rbl__L_c"}, {"formula": "C14H18N2O4", "notes": {"original_bigg_ids": ["rdmbzi[c]"]}, "compartment": "c", "name": "N1-(alpha-D-ribosyl)-5,6-dimethylbenzimidazole", "id": "rdmbzi_c"}, {"formula": "C9H17NO6S", "notes": {"original_bigg_ids": ["rhcys[c]"]}, "compartment": "c", "name": "S-Ribosyl-L-homocysteine", "id": "rhcys_c"}, {"formula": "C5H10O5", "notes": {"original_bigg_ids": ["rib-D[c]"]}, "compartment": "c", "name": "D-Ribose", "id": "rib__D_c"}, {"formula": "C17H20N4O6", "notes": {"original_bigg_ids": ["ribflv[c]"]}, "compartment": "c", "name": "Riboflavin", "id": "ribflv_c"}, {"formula": "C6H12O5", "notes": {"original_bigg_ids": ["rml[c]"]}, "compartment": "c", "name": "L-Rhamnulose", "id": "rml_c"}, {"formula": "C6H11O8P", "notes": {"original_bigg_ids": ["rml1p[c]"]}, "compartment": "c", "name": "L-Rhamnulose 1-phosphate", "id": "rml1p_c"}, {"formula": "C6H12O5", "notes": {"original_bigg_ids": ["rmn[c]"]}, "compartment": "c", "name": "L-Rhamnose", "id": "rmn_c"}, {"formula": "C11H15N2O5", "notes": {"original_bigg_ids": ["rnam[c]"]}, "compartment": "c", "name": "N Ribosylnicotinamide C11H15N2O5", "id": "rnam_c"}, {"formula": "C5H9O8P", "notes": {"original_bigg_ids": ["ru5p-D[c]"]}, "compartment": "c", "name": "D-Ribulose 5-phosphate", "id": "ru5p__D_c"}, {"formula": "C5H9O8P", "notes": {"original_bigg_ids": ["ru5p-L[c]"]}, "compartment": "c", "name": "L-Ribulose 5-phosphate", "id": "ru5p__L_c"}, {"formula": "C7H12O13P2", "notes": {"original_bigg_ids": ["s17bp[c]"]}, "compartment": "c", "name": "Sedoheptulose 1,7-bisphosphate", "id": "s17bp_c"}, {"formula": "C7H13O10P", "notes": {"original_bigg_ids": ["s7p[c]"]}, "compartment": "c", "name": "Sedoheptulose 7-phosphate", "id": "s7p_c"}, {"formula": "C42H39N4O16", "notes": {"original_bigg_ids": ["scl[c]"]}, "compartment": "c", "name": "Sirohydrochlorin", "id": "scl_c"}, {"formula": "HSe", "notes": {"original_bigg_ids": ["seln[c]"]}, "compartment": "c", "name": "Selenide", "id": "seln_c"}, {"formula": "H2O3PSe", "notes": {"original_bigg_ids": ["selnp[c]"]}, "compartment": "c", "name": "Selenophosphate", "id": "selnp_c"}, {"formula": "C3H7NO3", "notes": {"original_bigg_ids": ["ser-D[c]"]}, "compartment": "c", "name": "D-Serine", "id": "ser__D_c"}, {"formula": "C3H7NO3", "notes": {"original_bigg_ids": ["ser-L[c]"]}, "compartment": "c", "name": "L-Serine", "id": "ser__L_c"}, {"formula": "C3H6NO2R", "notes": {"original_bigg_ids": ["sertrna[c]"]}, "compartment": "c", "name": "L-Seryl-tRNA(Ser)", "id": "sertrna_c"}, {"formula": "C42H36FeN4O16", "notes": {"original_bigg_ids": ["sheme[c]"]}, "compartment": "c", "name": "Siroheme", "id": "sheme_c"}, {"formula": "C7H9O5", "notes": {"original_bigg_ids": ["skm[c]"]}, "compartment": "c", "name": "Shikimate", "id": "skm_c"}, {"formula": "C7H8O8P", "notes": {"original_bigg_ids": ["skm5p[c]"]}, "compartment": "c", "name": "Shikimate 5-phosphate", "id": "skm5p_c"}, {"formula": "C11H16N2O7", "notes": {"original_bigg_ids": ["sl26da[c]"]}, "compartment": "c", "name": "N-Succinyl-LL-2,6-diaminoheptanedioate", "id": "sl26da_c"}, {"formula": "C11H12NO8", "notes": {"original_bigg_ids": ["sl2a6o[c]"]}, "compartment": "c", "name": "N-Succinyl-2-L-amino-6-oxoheptanedioate", "id": "sl2a6o_c"}, {"formula": "O2S", "notes": {"original_bigg_ids": ["so2[c]"]}, "compartment": "c", "name": "Sulfur dioxide", "id": "so2_c"}, {"formula": "O3S", "notes": {"original_bigg_ids": ["so3[c]"]}, "compartment": "c", "name": "Sulfite", "id": "so3_c"}, {"formula": "O4S", "notes": {"original_bigg_ids": ["so4[c]"]}, "compartment": "c", "name": "Sulfate", "id": "so4_c"}, {"formula": "C7H22N3", "notes": {"original_bigg_ids": ["spmd[c]"]}, "compartment": "c", "name": "Spermidine", "id": "spmd_c"}, {"formula": "C39H66N7O17P3S", "notes": {"original_bigg_ids": ["stcoa[c]"]}, "compartment": "c", "name": "Stearoyl-CoA (n-C18:0CoA)", "id": "stcoa_c"}, {"formula": "C4H4O4", "notes": {"original_bigg_ids": ["succ[c]"]}, "compartment": "c", "name": "Succinate", "id": "succ_c"}, {"formula": "C25H35N7O19P3S", "notes": {"original_bigg_ids": ["succoa[c]"]}, "compartment": "c", "name": "Succinyl-CoA", "id": "succoa_c"}, {"formula": "C8H12NO6", "notes": {"original_bigg_ids": ["suchms[c]"]}, "compartment": "c", "name": "O-Succinyl-L-homoserine", "id": "suchms_c"}, {"formula": "C4H5O3", "notes": {"original_bigg_ids": ["sucsal[c]"]}, "compartment": "c", "name": "Succinic semialdehyde", "id": "sucsal_c"}, {"formula": "C29H51N2O8PRS", "notes": {"original_bigg_ids": ["t3c11vaceACP[c]"]}, "compartment": "c", "name": "Trans-3-cis-11-vacceoyl-[acyl-carrier protein]", "id": "t3c11vaceACP_c"}, {"formula": "C23H39N2O8PRS", "notes": {"original_bigg_ids": ["t3c5ddeceACP[c]"]}, "compartment": "c", "name": "Trans-3-cis-5-dodecenoyl-[acyl-carrier protein]", "id": "t3c5ddeceACP_c"}, {"formula": "C25H43N2O8PRS", "notes": {"original_bigg_ids": ["t3c7mrseACP[c]"]}, "compartment": "c", "name": "Trans-3-cis-7-myristoleoyl-[acyl-carrier protein]", "id": "t3c7mrseACP_c"}, {"formula": "C27H47N2O8PRS", "notes": {"original_bigg_ids": ["t3c9palmeACP[c]"]}, "compartment": "c", "name": "Trans-3-cis-9-palmitoleoyl-[acyl-carrier protein]", "id": "t3c9palmeACP_c"}, {"formula": "C6H11O9P", "notes": {"original_bigg_ids": ["tag6p-D[c]"]}, "compartment": "c", "name": "D-Tagatose 6-phosphate", "id": "tag6p__D_c"}, {"formula": "C6H10O12P2", "notes": {"original_bigg_ids": ["tagdp-D[c]"]}, "compartment": "c", "name": "D-Tagatose 1,6-biphosphate", "id": "tagdp__D_c"}, {"formula": "C2H7NO3S", "notes": {"original_bigg_ids": ["taur[c]"]}, "compartment": "c", "name": "Taurine", "id": "taur_c"}, {"formula": "C35H58N7O17P3S", "notes": {"original_bigg_ids": ["tdcoa[c]"]}, "compartment": "c", "name": "Tetradecanoyl-CoA (n-C14:0CoA)", "id": "tdcoa_c"}, {"formula": "C23H41N2O8PRS", "notes": {"original_bigg_ids": ["tddec2eACP[c]"]}, "compartment": "c", "name": "Trans-Dodec-2-enoyl-[acyl-carrier protein]", "id": "tddec2eACP_c"}, {"formula": "C25H45N2O8PRS", "notes": {"original_bigg_ids": ["tdeACP[c]"]}, "compartment": "c", "name": "Cis-tetradec-7-enoyl-[acyl-carrier protein] (n-C14:1)", "id": "tdeACP_c"}, {"formula": "C21H37N2O8PRS", "notes": {"original_bigg_ids": ["tdec2eACP[c]"]}, "compartment": "c", "name": "Trans-Dec-2-enoyl-[acyl-carrier protein]", "id": "tdec2eACP_c"}, {"formula": "C158H313N26O155P25", "notes": {"original_bigg_ids": ["teca_CL[c]"]}, "compartment": "c", "name": "Glycerol teichoic acid (n=25), unlinked, D-ala (specific CL)", "id": "teca_CL_c"}, {"formula": "C7H7NO4", "notes": {"original_bigg_ids": ["thdp[c]"]}, "compartment": "c", "name": "2,3,4,5-Tetrahydrodipicolinate", "id": "thdp_c"}, {"formula": "C17H29N2O8PRS", "notes": {"original_bigg_ids": ["thex2eACP[c]"]}, "compartment": "c", "name": "Trans-Hex-2-enoyl-[acyl-carrier protein]", "id": "thex2eACP_c"}, {"formula": "C19H21N7O6", "notes": {"original_bigg_ids": ["thf[c]"]}, "compartment": "c", "name": "5,6,7,8-Tetrahydrofolate", "id": "thf_c"}, {"formula": "C24H27N8O9", "notes": {"original_bigg_ids": ["thfglu[c]"]}, "compartment": "c", "name": "Tetrahydrofolyl Glu 2  C24H27N8O9", "id": "thfglu_c"}, {"formula": "C12H17N4OS", "notes": {"original_bigg_ids": ["thm[c]"]}, "compartment": "c", "name": "Thiamin", "id": "thm_c"}, {"formula": "C12H16N4O4PS", "notes": {"original_bigg_ids": ["thmmp[c]"]}, "compartment": "c", "name": "Thiamin monophosphate", "id": "thmmp_c"}, {"formula": "C12H16N4O7P2S", "notes": {"original_bigg_ids": ["thmpp[c]"]}, "compartment": "c", "name": "Thiamine diphosphate", "id": "thmpp_c"}, {"formula": "C4H9NO3", "notes": {"original_bigg_ids": ["thr-L[c]"]}, "compartment": "c", "name": "L-Threonine", "id": "thr__L_c"}, {"formula": "C4H8NO6P", "notes": {"original_bigg_ids": ["thrp[c]"]}, "compartment": "c", "name": "L-Threonine O-3-phosphate", "id": "thrp_c"}, {"formula": "C25H45N2O8PRS", "notes": {"original_bigg_ids": ["tmrs2eACP[c]"]}, "compartment": "c", "name": "Trans-Tetradec-2-enoyl-[acyl-carrier protein]", "id": "tmrs2eACP_c"}, {"formula": "C19H33N2O8PRS", "notes": {"original_bigg_ids": ["toct2eACP[c]"]}, "compartment": "c", "name": "Trans-Oct-2-enoyl-[acyl-carrier protein]", "id": "toct2eACP_c"}, {"formula": "C29H53N2O8PRS", "notes": {"original_bigg_ids": ["toctd2eACP[c]"]}, "compartment": "c", "name": "Trans-octadec-2-enoyl-[acyl-carrier protein]", "id": "toctd2eACP_c"}, {"formula": "C27H49N2O8PRS", "notes": {"original_bigg_ids": ["tpalm2eACP[c]"]}, "compartment": "c", "name": "Trans-Hexadec-2-enoyl-[acyl-carrier protein]", "id": "tpalm2eACP_c"}, {"formula": "X", "notes": {"original_bigg_ids": ["trdox[c]"]}, "compartment": "c", "name": "Oxidized thioredoxin", "id": "trdox_c"}, {"formula": "XH2", "notes": {"original_bigg_ids": ["trdrd[c]"]}, "compartment": "c", "name": "Reduced thioredoxin", "id": "trdrd_c"}, {"formula": "R", "notes": {"original_bigg_ids": ["trnaglu[c]"]}, "compartment": "c", "name": "TRNA (Glu)", "id": "trnaglu_c"}, {"formula": "R", "notes": {"original_bigg_ids": ["trnaile[c]"]}, "compartment": "c", "name": "TRNA(Ile)", "id": "trnaile_c"}, {"formula": "R", "notes": {"original_bigg_ids": ["trnaleu[c]"]}, "compartment": "c", "name": "TRNA(Leu)", "id": "trnaleu_c"}, {"formula": "R", "notes": {"original_bigg_ids": ["trnamet[c]"]}, "compartment": "c", "name": "TRNA(Met)", "id": "trnamet_c"}, {"formula": "R", "notes": {"original_bigg_ids": ["trnaphe[c]"]}, "compartment": "c", "name": "TRNA(Phe)", "id": "trnaphe_c"}, {"formula": "R", "notes": {"original_bigg_ids": ["trnaser[c]"]}, "compartment": "c", "name": "TRNA(Ser)", "id": "trnaser_c"}, {"formula": "R", "notes": {"original_bigg_ids": ["trnaval[c]"]}, "compartment": "c", "name": "TRNA(Val)", "id": "trnaval_c"}, {"formula": "C11H12N2O2", "notes": {"original_bigg_ids": ["trp-L[c]"]}, "compartment": "c", "name": "L-Tryptophan", "id": "trp__L_c"}, {"formula": "C14H27O2", "notes": {"original_bigg_ids": ["ttdca[c]"]}, "compartment": "c", "name": "Tetradecanoate (n-C14:0)", "id": "ttdca_c"}, {"formula": "C9H11NO3", "notes": {"original_bigg_ids": ["tyr-L[c]"]}, "compartment": "c", "name": "L-Tyrosine", "id": "tyr__L_c"}, {"formula": "C95H152N8O28P2", "notes": {"original_bigg_ids": ["uaagmda[c]"]}, "compartment": "c", "name": "Undecaprenyl-diphospho-N-acetylmuramoyl-(N-acetylglucosamine)-L-ala-D-glu-meso-2,6-diaminopimeloyl-D-ala-D-ala", "id": "uaagmda_c"}, {"formula": "C20H26N3O19P2", "notes": {"original_bigg_ids": ["uaccg[c]"]}, "compartment": "c", "name": "UDP-N-acetyl-3-O-(1-carboxyvinyl)-D-glucosamine", "id": "uaccg_c"}, {"formula": "C17H25N3O17P2", "notes": {"original_bigg_ids": ["uacgam[c]"]}, "compartment": "c", "name": "UDP-N-acetyl-D-glucosamine", 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["urea[c]"]}, "compartment": "c", "name": "Urea", "id": "urea_c"}, {"formula": "C9H12N2O6", "notes": {"original_bigg_ids": ["uri[c]"]}, "compartment": "c", "name": "Uridine", "id": "uri_c"}, {"formula": "C9H11N2O15P3", "notes": {"original_bigg_ids": ["utp[c]"]}, "compartment": "c", "name": "UTP", "id": "utp_c"}, {"formula": "C5H11NO2", "notes": {"original_bigg_ids": ["val-L[c]"]}, "compartment": "c", "name": "L-Valine", "id": "val__L_c"}, {"formula": "C5H10NOR", "notes": {"original_bigg_ids": ["valtrna[c]"]}, "compartment": "c", "name": "L-Valyl-tRNA(Val)", "id": "valtrna_c"}, {"formula": "C5H4N4O2", "notes": {"original_bigg_ids": ["xan[c]"]}, "compartment": "c", "name": "Xanthine", "id": "xan_c"}, {"formula": "C10H11N4O9P", "notes": {"original_bigg_ids": ["xmp[c]"]}, "compartment": "c", "name": "Xanthosine 5'-phosphate", "id": "xmp_c"}, {"formula": "C10H12N4O6", "notes": {"original_bigg_ids": ["xtsn[c]"]}, "compartment": "c", "name": "Xanthosine", "id": "xtsn_c"}, {"formula": 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"Allantoin", "id": "alltn_e"}, {"formula": "C5H10O5", "notes": {"original_bigg_ids": ["arab-L[e]"]}, "compartment": "e", "name": "L-Arabinose", "id": "arab__L_e"}, {"formula": "C15H26O13", "notes": {"original_bigg_ids": ["araban-L[e]"]}, "compartment": "e", "name": "Alpha-L-Arabinan (3 subunits)", "id": "araban__L_e"}, {"formula": "C6H15N4O2", "notes": {"original_bigg_ids": ["arg-L[e]"]}, "compartment": "e", "name": "L-Arginine", "id": "arg__L_e"}, {"formula": "C4H8N2O3", "notes": {"original_bigg_ids": ["asn-L[e]"]}, "compartment": "e", "name": "L-Asparagine", "id": "asn__L_e"}, {"formula": "C4H6NO4", "notes": {"original_bigg_ids": ["asp-L[e]"]}, "compartment": "e", "name": "L-Aspartate", "id": "asp__L_e"}, {"formula": "C4H10O2", "notes": {"original_bigg_ids": ["btd-RR[e]"]}, "compartment": "e", "name": " R R  2 3 Butanediol C4H10O2", "id": "btd_RR_e"}, {"formula": "C10H15N2O3S", "notes": {"original_bigg_ids": ["btn[e]"]}, "compartment": "e", "name": "Biotin", "id": "btn_e"}, {"formula": "C4H10O", "notes": {"original_bigg_ids": ["btoh[e]"]}, "compartment": "e", "name": "Butanol", "id": "btoh_e"}, {"formula": "C4H7O2", "notes": {"original_bigg_ids": ["but[e]"]}, "compartment": "e", "name": "Butyrate (n-C4:0)", "id": "but_e"}, {"formula": "Ca", "notes": {"original_bigg_ids": ["ca2[e]"]}, "compartment": "e", "name": "Calcium", "id": "ca2_e"}, {"formula": "C6H13N3O3", "notes": {"original_bigg_ids": ["citr-L[e]"]}, "compartment": "e", "name": "L-Citrulline", "id": "citr__L_e"}, {"formula": "Cl", "notes": {"original_bigg_ids": ["cl[e]"]}, "compartment": "e", "name": "Chloride", "id": "cl_e"}, {"formula": "CO", "notes": {"original_bigg_ids": ["co[e]"]}, "compartment": "e", "name": "Carbon monoxide", "id": "co_e"}, {"formula": "CO2", "notes": {"original_bigg_ids": ["co2[e]"]}, "compartment": "e", "name": "CO2", "id": "co2_e"}, {"formula": "Co", "notes": {"original_bigg_ids": ["cobalt2[e]"]}, "compartment": "e", "name": "Co2+", "id": "cobalt2_e"}, {"formula": "C4H5N3O", "notes": {"original_bigg_ids": ["csn[e]"]}, "compartment": "e", "name": "Cytosine", "id": "csn_e"}, {"formula": "Cu", "notes": {"original_bigg_ids": ["cu2[e]"]}, "compartment": "e", "name": "Cu2+", "id": "cu2_e"}, {"formula": "C3H7NO2S", "notes": {"original_bigg_ids": ["cys-L[e]"]}, "compartment": "e", "name": "L-Cysteine", "id": "cys__L_e"}, {"formula": "C2H6O", "notes": {"original_bigg_ids": ["etoh[e]"]}, "compartment": "e", "name": "Ethanol", "id": "etoh_e"}, {"formula": "Fe", "notes": {"original_bigg_ids": ["fe2[e]"]}, "compartment": "e", "name": "Fe2+", "id": "fe2_e"}, {"formula": "C19H18N7O6", "notes": {"original_bigg_ids": ["fol[e]"]}, "compartment": "e", "name": "Folate", "id": "fol_e"}, {"formula": "CH1O2", "notes": {"original_bigg_ids": ["for[e]"]}, "compartment": "e", "name": "Formate", "id": "for_e"}, {"formula": "C6H12O6", "notes": {"original_bigg_ids": ["fru[e]"]}, "compartment": "e", "name": "D-Fructose", "id": "fru_e"}, {"formula": "C6H12O6", "notes": {"original_bigg_ids": ["gal[e]"]}, "compartment": "e", "name": "D-Galactose", "id": "gal_e"}, {"formula": "C6H11O7", "notes": {"original_bigg_ids": ["galctn-D[e]"]}, "compartment": "e", "name": "D-Galactonate", "id": "galctn__D_e"}, {"formula": "C6H9O7", "notes": {"original_bigg_ids": ["galur[e]"]}, "compartment": "e", "name": "D-Galacturonate", "id": "galur_e"}, {"formula": "C6H12O6", "notes": {"original_bigg_ids": ["glc-D[e]"]}, "compartment": "e", "name": "D-Glucose", "id": "glc__D_e"}, {"formula": "C6H11O7", "notes": {"original_bigg_ids": ["glcn[e]"]}, "compartment": "e", "name": "D-Gluconate", "id": "glcn_e"}, {"formula": "C6H9O7", "notes": {"original_bigg_ids": ["glcur[e]"]}, "compartment": "e", "name": "D-Glucuronate", "id": "glcur_e"}, {"formula": "C5H10N2O3", "notes": {"original_bigg_ids": ["gln-L[e]"]}, "compartment": "e", "name": "L-Glutamine", "id": "gln__L_e"}, {"formula": "C5H8NO4", "notes": {"original_bigg_ids": ["glu-L[e]"]}, "compartment": "e", "name": "L-Glutamate", 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{"formula": "K", "notes": {"original_bigg_ids": ["k[e]"]}, "compartment": "e", "name": "Potassium", "id": "k_e"}, {"formula": "C3H5O3", "notes": {"original_bigg_ids": ["lac-D[e]"]}, "compartment": "e", "name": "D-Lactate", "id": "lac__D_e"}, {"formula": "C3H5O3", "notes": {"original_bigg_ids": ["lac-L[e]"]}, "compartment": "e", "name": "L-Lactate", "id": "lac__L_e"}, {"formula": "C6H13NO2", "notes": {"original_bigg_ids": ["leu-L[e]"]}, "compartment": "e", "name": "L-Leucine", "id": "leu__L_e"}, {"formula": "C6H15N2O2", "notes": {"original_bigg_ids": ["lys-L[e]"]}, "compartment": "e", "name": "L-Lysine", "id": "lys__L_e"}, {"formula": "C12H22O11", "notes": {"original_bigg_ids": ["malt[e]"]}, "compartment": "e", "name": "Maltose", "id": "malt_e"}, {"formula": "C36H62O31", "notes": {"original_bigg_ids": ["malthx[e]"]}, "compartment": "e", "name": "Maltohexaose", "id": "malthx_e"}, {"formula": "C18H32O16", "notes": {"original_bigg_ids": ["malttr[e]"]}, "compartment": "e", "name": 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"compartment": "e", "name": "Phosphate", "id": "pi_e"}, {"formula": "C5H9NO2", "notes": {"original_bigg_ids": ["pro-L[e]"]}, "compartment": "e", "name": "L-Proline", "id": "pro__L_e"}, {"formula": "C4H14N2", "notes": {"original_bigg_ids": ["ptrc[e]"]}, "compartment": "e", "name": "Putrescine", "id": "ptrc_e"}, {"formula": "C8H11NO3", "notes": {"original_bigg_ids": ["pydxn[e]"]}, "compartment": "e", "name": "Pyridoxine", "id": "pydxn_e"}, {"formula": "C3H3O3", "notes": {"original_bigg_ids": ["pyr[e]"]}, "compartment": "e", "name": "Pyruvate", "id": "pyr_e"}, {"formula": "C5H10O5", "notes": {"original_bigg_ids": ["rib-D[e]"]}, "compartment": "e", "name": "D-Ribose", "id": "rib__D_e"}, {"formula": "C17H20N4O6", "notes": {"original_bigg_ids": ["ribflv[e]"]}, "compartment": "e", "name": "Riboflavin", "id": "ribflv_e"}, {"formula": "C6H12O5", "notes": {"original_bigg_ids": ["rmn[e]"]}, "compartment": "e", "name": "L-Rhamnose", "id": "rmn_e"}, {"formula": "C3H7NO3", "notes": {"original_bigg_ids": ["ser-D[e]"]}, "compartment": "e", "name": "D-Serine", "id": "ser__D_e"}, {"formula": "C3H7NO3", "notes": {"original_bigg_ids": ["ser-L[e]"]}, "compartment": "e", "name": "L-Serine", "id": "ser__L_e"}, {"formula": "O4S", "notes": {"original_bigg_ids": ["so4[e]"]}, "compartment": "e", "name": "Sulfate", "id": "so4_e"}, {"formula": "C7H22N3", "notes": {"original_bigg_ids": ["spmd[e]"]}, "compartment": "e", "name": "Spermidine", "id": "spmd_e"}, {"formula": "C2H7NO3S", "notes": {"original_bigg_ids": ["taur[e]"]}, "compartment": "e", "name": "Taurine", "id": "taur_e"}, {"formula": "C12H17N4OS", "notes": {"original_bigg_ids": ["thm[e]"]}, "compartment": "e", "name": "Thiamin", "id": "thm_e"}, {"formula": "C11H12N2O2", "notes": {"original_bigg_ids": ["trp-L[e]"]}, "compartment": "e", "name": "L-Tryptophan", "id": "trp__L_e"}, {"formula": "C95H152N8O28P2", "notes": {"original_bigg_ids": ["uaagmda[e]"]}, "compartment": "e", "name": "Undecaprenyl-diphospho-N-acetylmuramoyl-(N-acetylglucosamine)-L-ala-D-glu-meso-2,6-diaminopimeloyl-D-ala-D-ala", "id": "uaagmda_e"}, {"formula": "C55H89O7P2", "notes": {"original_bigg_ids": ["udcpdp[e]"]}, "compartment": "e", "name": "Undecaprenyl diphosphate", "id": "udcpdp_e"}, {"formula": "C55H89O4P", "notes": {"original_bigg_ids": ["udcpp[e]"]}, "compartment": "e", "name": "Undecaprenyl phosphate", "id": "udcpp_e"}, {"formula": "C4H4N2O2", "notes": {"original_bigg_ids": ["ura[e]"]}, "compartment": "e", "name": "Uracil", "id": "ura_e"}, {"formula": "C5H11NO2", "notes": {"original_bigg_ids": ["val-L[e]"]}, "compartment": "e", "name": "L-Valine", "id": "val__L_e"}, {"formula": "C5H4N4O2", "notes": {"original_bigg_ids": ["xan[e]"]}, "compartment": "e", "name": "Xanthine", "id": "xan_e"}, {"formula": "C5H10O5", "notes": {"original_bigg_ids": ["xyl-D[e]"]}, "compartment": "e", "name": "D-Xylose", "id": "xyl__D_e"}, {"formula": "Zn", "notes": {"original_bigg_ids": ["zn2[e]"]}, "compartment": "e", "name": "Zinc", "id": "zn2_e"}], "version": 1, "id": "iHN637"}