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{"arbt_e": -1.0}, "id": "EX_arbt_e", "gene_reaction_rule": ""}, {"name": "Aerobactin minus Fe3 exchange", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["EX_arbtn_LPAREN_e_RPAREN_"]}, "metabolites": {"arbtn_e": -1.0}, "id": "EX_arbtn_e", "gene_reaction_rule": ""}, {"name": "Aerobactin exchange", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["EX_arbtn_DASH_fe3_LPAREN_e_RPAREN_"]}, "metabolites": {"arbtn_fe3_e": -1.0}, "id": "EX_arbtn_fe3_e", "gene_reaction_rule": ""}, {"name": "L-Arginine exchange", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["EX_arg_DASH_L_LPAREN_e_RPAREN_"]}, "metabolites": {"arg__L_e": -1.0}, "id": "EX_arg__L_e", "gene_reaction_rule": ""}, {"name": "L-Ascorbate exchange", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["EX_ascb_DASH_L_LPAREN_e_RPAREN_"]}, "metabolites": {"ascb__L_e": -1.0}, "id": "EX_ascb__L_e", "gene_reaction_rule": ""}, {"name": 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"Fe(III)hydroxamate exchange", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["EX_fe3hox_LPAREN_e_RPAREN_"]}, "metabolites": {"fe3hox_e": -1.0}, "id": "EX_fe3hox_e", "gene_reaction_rule": ""}, {"name": "Fe(III)hydoxamate, unloaded exchange", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["EX_fe3hox_DASH_un_LPAREN_e_RPAREN_"]}, "metabolites": {"fe3hox_un_e": -1.0}, "id": "EX_fe3hox_un_e", "gene_reaction_rule": ""}, {"name": "Ferrichrome exchange", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["EX_fecrm_LPAREN_e_RPAREN_"]}, "metabolites": {"fecrm_e": -1.0}, "id": "EX_fecrm_e", "gene_reaction_rule": ""}, {"name": "Ferrichrome minus Fe(III) exchange", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["EX_fecrm_DASH_un_LPAREN_e_RPAREN_"]}, "metabolites": {"fecrm_un_e": -1.0}, "id": "EX_fecrm_un_e", "gene_reaction_rule": ""}, {"name": "Fe-enterobactin exchange", "upper_bound": 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["EX_lcts_LPAREN_e_RPAREN_"]}, "metabolites": {"lcts_e": -1.0}, "id": "EX_lcts_e", "gene_reaction_rule": ""}, {"name": "L-Leucine exchange", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["EX_leu_DASH_L_LPAREN_e_RPAREN_"]}, "metabolites": {"leu__L_e": -1.0}, "id": "EX_leu__L_e", "gene_reaction_rule": ""}, {"name": "KDO(2)-lipid (A) exchange", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["EX_lipa_LPAREN_e_RPAREN_"]}, "metabolites": {"lipa_e": -1.0}, "id": "EX_lipa_e", "gene_reaction_rule": ""}, {"name": "Cold adapted KDO(2)-lipid (A) exchange", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["EX_lipa_cold_LPAREN_e_RPAREN_"]}, "metabolites": {"lipa_cold_e": -1.0}, "id": "EX_lipa_cold_e", "gene_reaction_rule": ""}, {"name": "Lipoate exchange", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["EX_lipoate_LPAREN_e_RPAREN_"]}, "metabolites": {"lipoate_e": -1.0}, "id": 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"notes": {"original_bigg_ids": ["23CUMPtex"]}, "metabolites": {"23cump_p": 1.0, "23cump_e": -1.0}, "id": "23CUMPtex", "gene_reaction_rule": "Z0302 or Z1276 or Z2333 or Z3473"}, {"subsystem": "Transport, Inner Membrane", "name": "2,3-diaminopropionate transport in via proton symport", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["23DAPPAt2pp"]}, "metabolites": {"h_p": -1.0, "h_c": 1.0, "23dappa_c": 1.0, "23dappa_p": -1.0}, "id": "23DAPPAt2pp", "gene_reaction_rule": ""}, {"subsystem": "Transport, Outer Membrane Porin", "name": "2,3-diaminopropionate transport via diffusion", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["23DAPPAtex"]}, "metabolites": {"23dappa_e": -1.0, "23dappa_p": 1.0}, "id": "23DAPPAtex", "gene_reaction_rule": "Z0302 or Z1276 or Z2333 or Z3473"}, {"subsystem": "Nucleotide Salvage Pathway", "name": "2',3'-cyclic-nucleotide phosphodiesterase (UMP) (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, 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"2-Acyl-sn-glycero-3-phosphatidate (n-C16:1) transporter via facilitated diffusion (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["2AGPA161tipp"]}, "metabolites": {"2hdec9eg3p_c": 1.0, "2hdec9eg3p_p": -1.0}, "id": "2AGPA161tipp", "gene_reaction_rule": "Z4153"}, {"subsystem": "Transport, Inner Membrane", "name": "2-Acyl-sn-glycero-3-phosphatidate (n-C18:0) transporter via facilitated diffusion (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["2AGPA180tipp"]}, "metabolites": {"2odecg3p_p": -1.0, "2odecg3p_c": 1.0}, "id": "2AGPA180tipp", "gene_reaction_rule": "Z4153"}, {"subsystem": "Transport, Inner Membrane", "name": "2-Acyl-sn-glycero-3-phosphatidate (n-C18:1) transporter via facilitated diffusion (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["2AGPA181tipp"]}, "metabolites": {"2odec11eg3p_p": -1.0, "2odec11eg3p_c": 1.0}, "id": "2AGPA181tipp", "gene_reaction_rule": "Z4153"}, {"subsystem": "Transport, Inner Membrane", "name": "2-Acyl-sn-glycero-3-phosphoethanolamine (n-C12:0) transporter via facilitated diffusion (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["2AGPE120tipp"]}, "metabolites": {"2agpe120_p": -1.0, "2agpe120_c": 1.0}, "id": "2AGPE120tipp", "gene_reaction_rule": "Z4153"}, {"subsystem": "Transport, Inner Membrane", "name": "2-Acyl-sn-glycero-3-phosphoethanolamine (n-C14:0) transporter via facilitated diffusion (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["2AGPE140tipp"]}, "metabolites": {"2agpe140_c": 1.0, "2agpe140_p": -1.0}, "id": "2AGPE140tipp", "gene_reaction_rule": "Z4153"}, {"subsystem": "Transport, Inner Membrane", "name": "2-Acyl-sn-glycero-3-phosphoethanolamine (n-C14:1) transporter via facilitated diffusion (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["2AGPE141tipp"]}, 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"2-acyl-glycerophospho-ethanolamine acyltransferase (n-C14:0)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["2AGPEAT140"]}, "metabolites": {"atp_c": -1.0, "pe140_c": 1.0, "ppi_c": 1.0, "2agpe140_c": -1.0, "amp_c": 1.0, "ttdca_c": -1.0}, "id": "2AGPEAT140", "gene_reaction_rule": "Z4154"}, {"subsystem": "Glycerophospholipid Metabolism", "name": "2-acyl-glycerophospho-ethanolamine acyltransferase (n-C14:1)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["2AGPEAT141"]}, "metabolites": {"atp_c": -1.0, "ppi_c": 1.0, "2agpe141_c": -1.0, "amp_c": 1.0, "pe141_c": 1.0, "ttdcea_c": -1.0}, "id": "2AGPEAT141", "gene_reaction_rule": "Z4154"}, {"subsystem": "Glycerophospholipid Metabolism", "name": "2-acyl-glycerophospho-ethanolamine acyltransferase (n-C16:0)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["2AGPEAT160"]}, "metabolites": {"2agpe160_c": -1.0, "atp_c": -1.0, "ppi_c": 1.0, "amp_c": 1.0, "hdca_c": 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(n-C14:1) transporter via facilitated diffusion (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["2AGPG141tipp"]}, "metabolites": {"2agpg141_p": -1.0, "2agpg141_c": 1.0}, "id": "2AGPG141tipp", "gene_reaction_rule": "Z4153"}, {"subsystem": "Transport, Inner Membrane", "name": "2-Acyl-sn-glycero-3-phosphoglycerol (n-C16:0) transporter via facilitated diffusion (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["2AGPG160tipp"]}, "metabolites": {"2agpg160_c": 1.0, "2agpg160_p": -1.0}, "id": "2AGPG160tipp", "gene_reaction_rule": "Z4153"}, {"subsystem": "Transport, Inner Membrane", "name": "2-Acyl-sn-glycero-3-phosphoglycerol (n-C16:1) transporter via facilitated diffusion (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["2AGPG161tipp"]}, "metabolites": {"2agpg161_c": 1.0, "2agpg161_p": -1.0}, "id": "2AGPG161tipp", "gene_reaction_rule": "Z4153"}, {"subsystem": "Transport, Inner Membrane", "name": "2-Acyl-sn-glycero-3-phosphoglycerol (n-C18:0) transporter via facilitated diffusion (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["2AGPG180tipp"]}, "metabolites": {"2agpg180_p": -1.0, "2agpg180_c": 1.0}, "id": "2AGPG180tipp", "gene_reaction_rule": "Z4153"}, {"subsystem": "Transport, Inner Membrane", "name": "2-Acyl-sn-glycero-3-phosphoglycerol (n-C18:1) transporter via facilitated diffusion (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["2AGPG181tipp"]}, "metabolites": {"2agpg181_p": -1.0, "2agpg181_c": 1.0}, "id": "2AGPG181tipp", "gene_reaction_rule": "Z4153"}, {"subsystem": "Glycerophospholipid Metabolism", "name": "2-acyl-glycerophospho-glycerol acyltransferase (n-C12:0)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["2AGPGAT120"]}, "metabolites": {"atp_c": -1.0, "ddca_c": -1.0, "ppi_c": 1.0, "amp_c": 1.0, "pg120_c": 1.0, "2agpg120_c": -1.0}, 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"gene_reaction_rule": "Z2250"}, {"subsystem": "Cofactor and Prosthetic Group Biosynthesis", "name": "Adenosyl cobinamide phosphate guanyltransferase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ACBIPGT"]}, "metabolites": {"adocbip_c": -1.0, "ppi_c": 1.0, "gtp_c": -1.0, "h_c": -1.0, "agdpcbi_c": 1.0}, "id": "ACBIPGT", "gene_reaction_rule": "Z3153"}, {"subsystem": "Membrane Lipid Metabolism", "name": "Acetyl-CoA carboxylase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ACCOAC"]}, "metabolites": {"malcoa_c": 1.0, "adp_c": 1.0, "atp_c": -1.0, "hco3_c": -1.0, "h_c": 1.0, "accoa_c": -1.0, "pi_c": 1.0}, "id": "ACCOAC", "gene_reaction_rule": "Z0197 and Z3578 and Z4615 and Z4616"}, {"subsystem": "Alternate Carbon Metabolism", "name": "Acetate-CoA ligase (ADP-forming)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ACCOAL"]}, "metabolites": {"ppcoa_c": 1.0, "atp_c": -1.0, "ppa_c": -1.0, "coa_c": -1.0, 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["ACGALtex"]}, "metabolites": {"acgal_p": 1.0, "acgal_e": -1.0}, "id": "ACGALtex", "gene_reaction_rule": "Z0302 or Z1276 or Z2333 or Z3473"}, {"subsystem": "Alternate Carbon Metabolism", "name": "N-acetyl-D-glucosamine 1-phosphatase (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ACGAM1PPpp"]}, "metabolites": {"pi_p": 1.0, "h2o_p": -1.0, "acgam_p": 1.0, "acgam1p_p": -1.0}, "id": "ACGAM1PPpp", "gene_reaction_rule": ""}, {"subsystem": "Transport, Outer Membrane Porin", "name": "N-acetyl-D-glucosamine 1-phosphate transport via diffusion (extracellular to periplasm)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["ACGAM1Ptex"]}, "metabolites": {"acgam1p_e": -1.0, "acgam1p_p": 1.0}, "id": "ACGAM1Ptex", "gene_reaction_rule": "Z0302 or Z1276 or Z2333 or Z3473"}, {"subsystem": "Murein Recycling", "name": "N-acetylglucosamine kinase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ACGAMK"]}, 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"Phosphoribosylaminoimidazole carboxylase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["AIRC2"]}, "metabolites": {"5caiz_c": 1.0, "atp_c": -1.0, "hco3_c": -1.0, "h_c": 1.0, "adp_c": 1.0, "air_c": -1.0, "pi_c": 1.0}, "id": "AIRC2", "gene_reaction_rule": "Z0677"}, {"subsystem": "Purine and Pyrimidine Biosynthesis", "name": "Phosphoribosylaminoimidazole carboxylase (mutase rxn)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["AIRC3"]}, "metabolites": {"5caiz_c": 1.0, "5aizc_c": -1.0}, "id": "AIRC3", "gene_reaction_rule": "Z0678"}, {"subsystem": "Citric Acid Cycle", "name": "2-Oxogluterate dehydrogenase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["AKGDH"]}, "metabolites": {"akg_c": -1.0, "nadh_c": 1.0, "succoa_c": 1.0, "coa_c": -1.0, "nad_c": -1.0, "co2_c": 1.0}, "id": "AKGDH", "gene_reaction_rule": "Z0126 and Z0880 and Z0881"}, {"subsystem": "Transport, Inner Membrane", "name": "2-oxoglutarate reversible transport via symport (periplasm)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["AKGt2rpp"]}, "metabolites": {"akg_c": 1.0, "akg_p": -1.0, "h_c": 1.0, "h_p": -1.0}, "id": "AKGt2rpp", "gene_reaction_rule": "Z3872"}, {"subsystem": "Transport, Outer Membrane Porin", "name": "Alpha-ketoglutarate transport via diffusion (extracellular to periplasm)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["AKGtex"]}, "metabolites": {"akg_p": 1.0, "akg_e": -1.0}, "id": "AKGtex", "gene_reaction_rule": "Z0302 or Z1276 or Z2333 or Z3473"}, {"subsystem": "Murein Recycling", "name": "D-alanine-D-alanine dipeptidase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ALAALAD"]}, "metabolites": {"h2o_c": -1.0, "ala__D_c": 2.0, "alaala_c": -1.0}, "id": "ALAALAD", "gene_reaction_rule": "Z2222"}, {"subsystem": "Transport, Inner Membrane", "name": "D-alanyl-D-alanine (DalaDala) transport via 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-1.0, "alaala_p": 1.0}, "id": "ALAALAtex", "gene_reaction_rule": "Z0302 or Z1276 or Z2333 or Z3473"}, {"subsystem": "Murein Recycling", "name": "L-alanyl-gamma-glutamate epimerase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["ALAGLUE"]}, "metabolites": {"LalaDglu_c": -1.0, "LalaLglu_c": 1.0}, "id": "ALAGLUE", "gene_reaction_rule": "Z2450"}, {"subsystem": "Alanine and Aspartate Metabolism", "name": "Alanine racemase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["ALAR"]}, "metabolites": {"ala__L_c": -1.0, "ala__D_c": 1.0}, "id": "ALAR", "gene_reaction_rule": "Z1953 or Z5651"}, {"subsystem": "Cofactor and Prosthetic Group Biosynthesis", "name": "D-alanine transaminase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ALATA_D2"]}, "metabolites": {"ala__D_c": -1.0, "pyr_c": 1.0, "pydx5p_c": -1.0, "pyam5p_c": 1.0}, "id": "ALATA_D2", "gene_reaction_rule": "Z3827 or Z1104"}, {"subsystem": "Alanine and Aspartate Metabolism", "name": "L-alanine transaminase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["ALATA_L"]}, "metabolites": {"akg_c": -1.0, "glu__L_c": 1.0, "ala__L_c": -1.0, "pyr_c": 1.0}, "id": "ALATA_L", "gene_reaction_rule": "Z3551 or Z3644"}, {"subsystem": "Cofactor and Prosthetic Group Biosynthesis", "name": "Alanine transaminase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ALATA_L2"]}, "metabolites": {"ala__L_c": -1.0, "pyr_c": 1.0, "pydx5p_c": -1.0, "pyam5p_c": 1.0}, "id": "ALATA_L2", "gene_reaction_rule": "Z1104 or Z3827"}, {"subsystem": "tRNA Charging", "name": "Alanyl-tRNA synthetase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ALATRS"]}, "metabolites": {"trnaala_c": -1.0, "atp_c": -1.0, "ppi_c": 1.0, "ala__L_c": -1.0, "amp_c": 1.0, "alatrna_c": 1.0}, "id": "ALATRS", "gene_reaction_rule": "Z3999"}, {"subsystem": "Transport, Inner Membrane", "name": "L-alanine transport via ABC system (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ALAabcpp"]}, "metabolites": {"h2o_c": -1.0, "atp_c": -1.0, "ala__L_c": 1.0, "h_c": 1.0, "adp_c": 1.0, "pi_c": 1.0, "ala__L_p": -1.0}, "id": "ALAabcpp", "gene_reaction_rule": "Z4824 and Z4825 and Z4827 and Z4834 and Z4826"}, {"subsystem": "Transport, Inner Membrane", "name": "L-alanine transport in via proton symport (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ALAt2pp", "ALAt2rpp"]}, "metabolites": {"ala__L_c": 1.0, "h_c": 1.0, "h_p": -1.0, "ala__L_p": -1.0}, "id": "ALAt2pp_copy1", "gene_reaction_rule": "Z5819"}, {"subsystem": "Transport, Inner Membrane", "name": "L-alanine transport in via proton symport (periplasm)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["ALAt2pp", "ALAt2rpp"]}, "metabolites": {"ala__L_c": 1.0, "h_c": 1.0, "h_p": -1.0, "ala__L_p": -1.0}, "id": 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"Lysine/Cadaverine antiporter (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["CADVtpp"]}, "metabolites": {"lys__L_c": 1.0, "h_p": -1.0, "15dap_p": 1.0, "h_c": 1.0, "lys__L_p": -1.0, "15dap_c": -1.0}, "id": "CADVtpp", "gene_reaction_rule": "Z5735"}, {"subsystem": "Unassigned", "name": "Catalase", "upper_bound": 0.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["CAT"]}, "metabolites": {"h2o2_c": -2.0, "h2o_c": 2.0, "o2_c": 1.0}, "id": "CAT", "gene_reaction_rule": "Z2761 or Z5497"}, {"subsystem": "Inorganic Ion Transport and Metabolism", "name": "Calcium / sodium antiporter (1:1)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["CAt6pp"]}, "metabolites": {"na1_p": -1.0, "na1_c": 1.0, "ca2_c": -1.0, "ca2_p": 1.0}, "id": "CAt6pp", "gene_reaction_rule": "Z4559"}, {"subsystem": "Cofactor and Prosthetic Group Biosynthesis", "name": "Cobinamide adenyltransferase", "upper_bound": 1000.0, "lower_bound": -1000.0, 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Phosphorylation", "name": "Cytochrome oxidase bd (menaquinol-8: 2 protons) (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["CYTBD2pp"]}, "metabolites": {"o2_c": -0.5, "h2o_c": 1.0, "mqn8_c": 1.0, "h_p": 2.0, "h_c": -2.0, "mql8_c": -1.0}, "id": "CYTBD2pp", "gene_reaction_rule": "Z1395 and Z1396"}, {"subsystem": "Oxidative Phosphorylation", "name": "Cytochrome oxidase bd (ubiquinol-8: 2 protons) (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["CYTBDpp"]}, "metabolites": {"o2_c": -0.5, "h2o_c": 1.0, "h_p": 2.0, "q8h2_c": -1.0, "h_c": -2.0, "q8_c": 1.0}, "id": "CYTBDpp", "gene_reaction_rule": "(Z1395 and Z1396) or (Z0900 and Z0901)"}, {"subsystem": "Oxidative Phosphorylation", "name": "Cytochrome oxidase bo3 (ubiquinol-8: 4 protons) (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["CYTBO3_4pp"]}, "metabolites": {"o2_c": -0.5, "h2o_c": 1.0, "h_p": 4.0, "q8h2_c": -1.0, 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"Z3234"}, {"subsystem": "Transport, Inner Membrane", "name": "Cytidine transport in via proton symport (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["CYTDt2pp", "CYTDt2rpp"]}, "metabolites": {"cytd_c": 1.0, "cytd_p": -1.0, "h_c": 1.0, "h_p": -1.0}, "id": "CYTDt2pp_copy1", "gene_reaction_rule": "Z3659 or Z4309"}, {"subsystem": "Transport, Outer Membrane Porin", "name": "Cytidine transport via diffusion (extracellular to periplasm)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["CYTDtex"]}, "metabolites": {"cytd_p": 1.0, "cytd_e": -1.0}, "id": "CYTDtex", "gene_reaction_rule": "Z0302 or Z1276 or Z2333 or Z3473"}, {"subsystem": "Nucleotide Salvage Pathway", "name": "Cytidylate kinase (CMP)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["CYTK1"]}, "metabolites": {"cdp_c": 1.0, "adp_c": 1.0, "atp_c": -1.0, "cmp_c": -1.0}, "id": "CYTK1", "gene_reaction_rule": "Z1256"}, {"subsystem": "Nucleotide Salvage Pathway", "name": "Cytidylate kinase (dCMP)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["CYTK2"]}, "metabolites": {"dcmp_c": -1.0, "adp_c": 1.0, "atp_c": -1.0, "dcdp_c": 1.0}, "id": "CYTK2", "gene_reaction_rule": "Z1256"}, {"subsystem": "Transport, Inner Membrane", "name": "D-lactate transport via proton symport (periplasm)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["D_DASH_LACt2pp"]}, "metabolites": {"lac__D_c": 1.0, "h_c": 1.0, "h_p": -1.0, "lac__D_p": -1.0}, "id": "D_LACt2pp", "gene_reaction_rule": "Z5030"}, {"subsystem": "Transport, Outer Membrane Porin", "name": "D-lactate transport via diffusion (extracellular to periplasm)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["D_DASH_LACtex"]}, "metabolites": {"lac__D_e": -1.0, "lac__D_p": 1.0}, "id": "D_LACtex", "gene_reaction_rule": "Z0302 or Z1276 or Z2333 or Z3473"}, {"subsystem": "Alanine and Aspartate Metabolism", "name": "D-Amino acid dehydrogenase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["DAAD"]}, "metabolites": {"h2o_c": -1.0, "pyr_c": 1.0, "fadh2_c": 1.0, "ala__D_c": -1.0, "nh4_c": 1.0, "fad_c": -1.0}, "id": "DAAD", "gene_reaction_rule": "Z1952"}, {"subsystem": "Nucleotide Salvage Pathway", "name": "Deoxyadenosine deaminase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["DADA"]}, "metabolites": {"din_c": 1.0, "dad_2_c": -1.0, "h2o_c": -1.0, "nh4_c": 1.0, "h_c": -1.0}, "id": "DADA", "gene_reaction_rule": "Z2628"}, {"subsystem": "Nucleotide Salvage Pathway", "name": "Deoxyadenylate kinase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["DADK", "DAMPK"]}, "metabolites": {"dadp_c": 1.0, "damp_c": -1.0, "atp_c": -1.0, "adp_c": 1.0}, "id": "DADK_copy1", "gene_reaction_rule": "Z0591"}, {"subsystem": "Transport, Inner Membrane", "name": "Deoxyadenosine transport in via proton symport (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["DADNt2pp"]}, "metabolites": {"dad_2_c": 1.0, "dad_2_p": -1.0, "h_c": 1.0, "h_p": -1.0}, "id": "DADNt2pp", "gene_reaction_rule": "Z4309 or Z3659"}, {"subsystem": "Transport, Outer Membrane", "name": "Deoxyadenosine transport via diffusion (extracellular to periplasm)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["DADNtex"]}, "metabolites": {"dad_2_p": 1.0, "dad_2_e": -1.0}, "id": "DADNtex", "gene_reaction_rule": "Z0512"}, {"subsystem": "Glycerophospholipid Metabolism", "name": "Diacylglycerol kinase (n-C12:0)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["DAGK120"]}, "metabolites": {"adp_c": 1.0, "pa120_c": 1.0, "h_c": 1.0, "atp_c": -1.0, "12dgr120_c": -1.0}, "id": "DAGK120", "gene_reaction_rule": "Z5641"}, {"subsystem": "Glycerophospholipid Metabolism", "name": "Diacylglycerol kinase (n-C14:0)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["DAGK140"]}, "metabolites": {"h_c": 1.0, "pa140_c": 1.0, "12dgr140_c": -1.0, "atp_c": -1.0, "adp_c": 1.0}, "id": "DAGK140", "gene_reaction_rule": "Z5641"}, {"subsystem": "Glycerophospholipid Metabolism", "name": "Diacylglycerol kinase (n-C14:1)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["DAGK141"]}, "metabolites": {"pa141_c": 1.0, "12dgr141_c": -1.0, "atp_c": -1.0, "adp_c": 1.0, "h_c": 1.0}, "id": "DAGK141", "gene_reaction_rule": "Z5641"}, {"subsystem": "Glycerophospholipid Metabolism", "name": "Diacylglycerol kinase (n-C16:0)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["DAGK160"]}, "metabolites": {"pa160_c": 1.0, "12dgr160_c": -1.0, "h_c": 1.0, "atp_c": -1.0, "adp_c": 1.0}, "id": "DAGK160", "gene_reaction_rule": "Z5641"}, {"subsystem": "Glycerophospholipid Metabolism", "name": "Diacylglycerol kinase (n-C16:1)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["DAGK161"]}, "metabolites": {"pa161_c": 1.0, "12dgr161_c": -1.0, "adp_c": 1.0, "atp_c": -1.0, "h_c": 1.0}, "id": "DAGK161", "gene_reaction_rule": "Z5641"}, {"subsystem": "Glycerophospholipid Metabolism", "name": "Diacylglycerol kinase (n-C18:0)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["DAGK180"]}, "metabolites": {"12dgr180_c": -1.0, "atp_c": -1.0, "h_c": 1.0, "adp_c": 1.0, "pa180_c": 1.0}, "id": "DAGK180", "gene_reaction_rule": "Z5641"}, {"subsystem": "Glycerophospholipid Metabolism", "name": "Diacylglycerol kinase (n-C18:1)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["DAGK181"]}, "metabolites": {"adp_c": 1.0, "12dgr181_c": -1.0, "atp_c": -1.0, "pa181_c": 1.0, "h_c": 1.0}, "id": "DAGK181", "gene_reaction_rule": "Z5641"}, {"subsystem": "Transport, Inner Membrane", "name": "D-alanine transport in via proton symport (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": 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{"original_bigg_ids": ["DAPAL"]}, "metabolites": {"h2o_c": -1.0, "pyr_c": 1.0, "nh4_c": 2.0, "23dappa_c": -1.0}, "id": "DAPAL", "gene_reaction_rule": "Z4210"}, {"subsystem": "Threonine and Lysine Metabolism", "name": "Diaminopimelate decarboxylase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["DAPDC"]}, "metabolites": {"co2_c": 1.0, "lys__L_c": 1.0, "h_c": -1.0, "26dap__M_c": -1.0}, "id": "DAPDC", "gene_reaction_rule": "Z4156"}, {"subsystem": "Threonine and Lysine Metabolism", "name": "Diaminopimelate epimerase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["DAPE"]}, "metabolites": {"26dap_LL_c": -1.0, "26dap__M_c": 1.0}, "id": "DAPE", "gene_reaction_rule": "Z5326"}, {"subsystem": "Transport, Inner Membrane", "name": "M-diaminopimelic acid ABC transport (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["DAPabcpp"]}, "metabolites": {"h2o_c": -1.0, "atp_c": -1.0, "26dap__M_c": 1.0, 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"Z2512"}, {"subsystem": "Cell Envelope Biosynthesis", "name": "Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C8:0)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["EAR80y"]}, "metabolites": {"ocACP_c": 1.0, "nadp_c": 1.0, "nadph_c": -1.0, "h_c": -1.0, "toct2eACP_c": -1.0}, "id": "EAR80y", "gene_reaction_rule": "Z2512"}, {"subsystem": "Lipopolysaccharide Biosynthesis / Recycling", "name": "Enterobacterial common antigen (x4) core oligosaccharide lipid A transport via ABC system (periplasm to extracellular)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ECA4COLIPAabctex"]}, "metabolites": {"eca4colipa_e": 1.0, "h2o_c": -1.0, "atp_c": -1.0, "eca4colipa_p": -1.0, "h_c": 1.0, "adp_c": 1.0, "pi_c": 1.0}, "id": "ECA4COLIPAabctex", "gene_reaction_rule": "Z4563 and Z4564 and Z4562 and Z5873 and Z5874"}, {"subsystem": "Lipopolysaccharide Biosynthesis / Recycling", "name": "Enterobacterial common antigen polymerase (periplasm)", 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"L-lactate reversible transport via proton symport (periplasm)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["L_DASH_LACt2rpp"]}, "metabolites": {"lac__L_c": 1.0, "h_c": 1.0, "h_p": -1.0, "lac__L_p": -1.0}, "id": "L_LACt2rpp", "gene_reaction_rule": "Z5030"}, {"subsystem": "Transport, Outer Membrane Porin", "name": "L-lactate transport via diffusion (extracellular to periplasm)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["L_DASH_LACtex"]}, "metabolites": {"lac__L_e": -1.0, "lac__L_p": 1.0}, "id": "L_LACtex", "gene_reaction_rule": "Z1276 or Z2333 or Z3473 or Z0302"}, {"subsystem": "Lipopolysaccharide Biosynthesis / Recycling", "name": "4-amino-4-deoxy-L-arabinotransferase (LPS lipid A modification, periplasmic face of membrane))", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["LA4NTpp"]}, "metabolites": {"colipa_p": -1.0, "udcpp_p": 1.0, "acolipa_p": 1.0, "uLa4n_p": -1.0}, "id": "LA4NTpp", "gene_reaction_rule": "Z3515"}, {"subsystem": "Alternate Carbon Metabolism", "name": "B-galactosidase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["LACZ"]}, "metabolites": {"lcts_c": -1.0, "glc__D_c": 1.0, "h2o_c": -1.0, "gal_c": 1.0}, "id": "LACZ", "gene_reaction_rule": "Z0440"}, {"subsystem": "Alternate Carbon Metabolism", "name": "B-galactosidase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["LACZpp"]}, "metabolites": {"gal_p": 1.0, "h2o_p": -1.0, "glc__D_p": 1.0, "lcts_p": -1.0}, "id": "LACZpp", "gene_reaction_rule": "Z3381"}, {"subsystem": "Murein Recycling", "name": "L-alanyl-gamma-D-glutamyl-meso-diaminopimelate hydrolase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["LADGMDH"]}, "metabolites": {"h2o_c": -1.0, "26dap__M_c": 1.0, "LalaDglu_c": 1.0, "LalaDgluMdap_c": -1.0}, "id": "LADGMDH", "gene_reaction_rule": "Z2448"}, {"subsystem": "Transport, Outer Membrane Porin", "name": "L-alanyl-D-glutamate transport via diffusion (extracellular to periplasm)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["LALADGLUtex"]}, "metabolites": {"LalaDglu_p": 1.0, "LalaDglu_e": -1.0}, "id": "LALADGLUtex", "gene_reaction_rule": "Z3473 or Z2333 or Z0302 or Z1276"}, {"subsystem": "Transport, Inner Membrane", "name": "L-alanyl-D-glutamate transport in via proton symport (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["LALADGLUtpp"]}, "metabolites": {"LalaDglu_p": -1.0, "LalaDglu_c": 1.0, "h_c": 1.0, "h_p": -1.0}, "id": "LALADGLUtpp", "gene_reaction_rule": "Z2646 or Z4896 or Z5733 or Z0860"}, {"subsystem": "Transport, Outer Membrane Porin", "name": "L-alanyl-L-glutamate transport via diffusion (extracellular to periplasm)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["LALALGLUtex"]}, "metabolites": {"LalaLglu_p": 1.0, "LalaLglu_e": -1.0}, "id": "LALALGLUtex", 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(periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["LPLIPAL1A161pp"]}, "metabolites": {"h2o_p": -1.0, "1hdec9eg3p_p": -1.0, "hdcea_p": 1.0, "h_p": 1.0, "glyc3p_p": 1.0}, "id": "LPLIPAL1A161pp", "gene_reaction_rule": "Z0647"}, {"subsystem": "Glycerophospholipid Metabolism", "name": "Lysophospholipase L1 (2-acylglycerophosphotidate, n-C18:0) (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["LPLIPAL1A180pp"]}, "metabolites": {"h2o_p": -1.0, "ocdca_p": 1.0, "1odecg3p_p": -1.0, "h_p": 1.0, "glyc3p_p": 1.0}, "id": "LPLIPAL1A180pp", "gene_reaction_rule": "Z0647"}, {"subsystem": "Glycerophospholipid Metabolism", "name": "Lysophospholipase L1 (2-acylglycerophosphotidate, n-C18:1) (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["LPLIPAL1A181pp"]}, "metabolites": {"glyc3p_p": 1.0, "ocdcea_p": 1.0, "1odec11eg3p_p": -1.0, "h_p": 1.0, "h2o_p": -1.0}, "id": "LPLIPAL1A181pp", 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"Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C14:1)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["LPLIPAL2E141"]}, "metabolites": {"2agpe141_c": -1.0, "h2o_c": -1.0, "ttdcea_c": 1.0, "h_c": 1.0, "g3pe_c": 1.0}, "id": "LPLIPAL2E141", "gene_reaction_rule": "Z5346"}, {"subsystem": "Glycerophospholipid Metabolism", "name": "Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C16:0)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["LPLIPAL2E160"]}, "metabolites": {"h2o_c": -1.0, "hdca_c": 1.0, "h_c": 1.0, "2agpe160_c": -1.0, "g3pe_c": 1.0}, "id": "LPLIPAL2E160", "gene_reaction_rule": "Z5346"}, {"subsystem": "Glycerophospholipid Metabolism", "name": "Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C16:1)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["LPLIPAL2E161"]}, "metabolites": {"hdcea_c": 1.0, "h2o_c": -1.0, "g3pe_c": 1.0, "h_c": 1.0, "2agpe161_c": -1.0}, "id": 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{"subsystem": "Cell Envelope Biosynthesis", "name": "Myo-inositol 1-phosphatase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["MI1PP"]}, "metabolites": {"h2o_c": -1.0, "pi_c": 1.0, "inost_c": 1.0, "mi1p__D_c": -1.0}, "id": "MI1PP", "gene_reaction_rule": "suhB"}, {"subsystem": "Alternate Carbon Metabolism", "name": "2-methylisocitrate dehydratase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["MICITDr"]}, "metabolites": {"h2o_c": -1.0, "2mcacn_c": -1.0, "micit_c": 1.0}, "id": "MICITDr", "gene_reaction_rule": "Z0128"}, {"subsystem": "Transport, Outer Membrane Porin", "name": "Minocycline transport via diffusion (extracellular to periplasm)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["MINCYCtex"]}, "metabolites": {"mincyc_e": -1.0, "mincyc_p": 1.0}, "id": "MINCYCtex", "gene_reaction_rule": "Z2333 or Z3473 or Z1276 or Z0302"}, {"subsystem": "Transport, Outer Membrane", "name": "Minocycline 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(periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["MLDCP3App"]}, "metabolites": {"h2o_p": -1.0, "murein3px3p_p": 1.0, "murein5px3p_p": -1.0, "alaala_p": 1.0}, "id": "MLDCP3App", "gene_reaction_rule": ""}, {"subsystem": "Murein Recycling", "name": "Murein L,D-endopeptidase (murein3px3p) (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["MLDEP1pp"]}, "metabolites": {"h2o_p": -1.0, "murein3px3p_p": -1.0, "murein3p3p_p": 1.0}, "id": "MLDEP1pp", "gene_reaction_rule": ""}, {"subsystem": "Murein Recycling", "name": "Murein L,D-endopeptidase (murein5px3p) (periplasm)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["MLDEP2pp"]}, "metabolites": {"h2o_p": -1.0, "murein5px3p_p": -1.0, "murein5p3p_p": 1.0}, "id": "MLDEP2pp", "gene_reaction_rule": ""}, {"subsystem": "Alternate Carbon Metabolism", "name": "Maltodextrin glucosidase (maltotriose)", "upper_bound": 1000.0, "lower_bound": 0.0, 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"Z0302 or Z2333 or Z3473"}, {"subsystem": "Translation", "name": "Pseudouridylate synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["PSUDS"]}, "metabolites": {"ura_c": -1.0, "h2o_c": 1.0, "psd5p_c": 1.0, "r5p_c": -1.0, "h_c": -2.0}, "id": "PSUDS", "gene_reaction_rule": "Z3888"}, {"subsystem": "Exchange", "name": "O antigen x20 core oligosaccharide lipid A exchange", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["EX_colipa20Oag_LPAREN_e_RPAREN_"]}, "metabolites": {"colipa20Oag_e": -1.0}, "id": "EX_colipa20Oag_e", "gene_reaction_rule": ""}, {"subsystem": "Alternate Carbon Metabolism", "name": "2-dehydro-3-deoxy-6-phosphogalactonate aldolase", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["DDPGALA"]}, "metabolites": {"2dh3dgal6p_c": -1.0, "pyr_c": 1.0, "g3p_c": 1.0}, "id": "DDPGALA", "gene_reaction_rule": ""}, {"subsystem": "Inorganic Ion Transport and Metabolism", "name": "Enterobactin 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-1000.0, "notes": {"original_bigg_ids": ["TAGtex"]}, "metabolites": {"tag__D_p": 1.0, "tag__D_e": -1.0}, "id": "TAGtex", "gene_reaction_rule": "Z0302 or Z2333 or Z3473"}, {"subsystem": "Cofactor and Prosthetic Group Biosynthesis", "name": "Nmn hydrolysis", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["NMNR"]}, "metabolites": {"h2o_e": -1.0, "nmn_e": -1.0, "rnam_e": 1.0, "pi_e": 1.0}, "id": "NMNR", "gene_reaction_rule": "Z4075"}, {"subsystem": "Nucleotide Salvage Pathway", "name": "Purine-nucleoside phosphorylase (Xanthosine)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["PUNP7"]}, "metabolites": {"pi_c": -1.0, "r1p_c": 1.0, "xan_c": 1.0, "xtsn_c": -1.0}, "id": "PUNP7", "gene_reaction_rule": "xapA"}, {"subsystem": "Transport Outer Membrane Porin", "name": "Cisaconitat transport via diffusion extracellular to periplasm ", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["ACONCtex"]}, "metabolites": {"acon_C_e": -1.0, "acon_C_p": 1.0}, "id": "ACONCtex", "gene_reaction_rule": "Z0302 or Z2333 or Z3473"}, {"subsystem": "Exchange", "name": "Ferrioxamine G fe exchange", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["EX_feroxGfe_LPAREN_e_RPAREN_"]}, "metabolites": {"feroxGfe_e": -1.0}, "id": "EX_feroxGfe_e", "gene_reaction_rule": ""}, {"subsystem": "Cofactor and Prosthetic Group Biosynthesis", "name": "Adenosylcobalamin phosphate synthase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["ADOCBLPS"]}, "metabolites": {"5prdmbz_c": -1.0, "gmp_c": 1.0, "h_c": 1.0, "adocblp_c": 1.0, "agdpcbi_c": -1.0}, "id": "ADOCBLPS", "gene_reaction_rule": "Z3152"}, {"subsystem": "Inorganic Ion Transport and Metabolism", "name": "Salmochelin s2 Fe III reduction and offloading", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["SALCHS2FER1"]}, "metabolites": {"fe2_c": 2.0, "salchs2_c": 2.0, "fadh2_c": -1.0, "salchs2fe_c": -2.0, "h_c": 2.0, "fad_c": 1.0}, "id": "SALCHS2FER1", "gene_reaction_rule": "Z1191 or Z1631"}, {"subsystem": "Inorganic Ion Transport and Metabolism", "name": "Salmochelin s2 Fe III reduction and offloading", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["SALCHS2FER2"]}, "metabolites": {"fe2_c": 2.0, "salchs2_c": 2.0, "fmnh2_c": -1.0, "salchs2fe_c": -2.0, "h_c": 2.0, "fmn_c": 1.0}, "id": "SALCHS2FER2", "gene_reaction_rule": "Z1191 or Z1631"}, {"subsystem": "Inorganic Ion Transport and Metabolism", "name": "Salmochelin s2 Fe III reduction and offloading", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["SALCHS2FER3"]}, "metabolites": {"rbflvrd_c": -1.0, "fe2_c": 2.0, "salchs2_c": 2.0, "salchs2fe_c": -2.0, "h_c": 2.0, "ribflv_c": 1.0}, "id": "SALCHS2FER3", "gene_reaction_rule": "Z1191 or Z1631"}, {"subsystem": "Exchange", "name": "Salmochelin-S2 Exchange", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["EX_salchs2_LPAREN_e_RPAREN_"]}, "metabolites": {"salchs2_e": -1.0}, "id": "EX_salchs2_e", "gene_reaction_rule": ""}, {"subsystem": "Cofactor and Prosthetic Group Biosynthesis", "name": "Sirohydrochlorin cobaltochelatase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["DSCLCOCH"]}, "metabolites": {"dscl_c": -1.0, "codscl2_c": 1.0, "cobalt2_c": -1.0, "h_c": 2.0}, "id": "DSCLCOCH", "gene_reaction_rule": "Z4729"}, {"subsystem": "Transport Outer Membrane Porin", "name": "Aminoimidazole riboside transport via diffusion extracellular to periplasm ", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["AIRStex"]}, "metabolites": {"airs_p": 1.0, "airs_e": -1.0}, "id": "AIRStex", "gene_reaction_rule": "Z0302 or Z2333 or Z3473"}, {"subsystem": "Membrane Lipid Metabolism", "name": "3-cis-2-trans-enoyl-CoA isomerase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["CTECOAI8", "ODECOAI"]}, "metabolites": {"od2coa_c": 1.0, "odecoa_c": -1.0}, "id": "CTECOAI8_copy2", "gene_reaction_rule": "Z5367"}, {"subsystem": "Membrane Lipid Metabolism", "name": "3-hydroxyacyl-CoA dehydrogenase (acetoacetyl-CoA)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["HACD1i"]}, "metabolites": {"aacoa_c": 1.0, "3hbcoa_c": -1.0, "nadh_c": 1.0, "h_c": 1.0, "nad_c": -1.0}, "id": "HACD1i", "gene_reaction_rule": "Z5367 or Z3604"}, {"subsystem": "Exchange", "name": "N-Ribosylnicotinamide Exchange", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["EX_rnam_LPAREN_e_RPAREN_"]}, "metabolites": {"rnam_e": -1.0}, "id": "EX_rnam_e", "gene_reaction_rule": ""}, {"subsystem": "Exchange", "name": "Aminoimidazole riboside exchange", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["EX_airs_LPAREN_e_RPAREN_"]}, "metabolites": {"airs_e": -1.0}, "id": "EX_airs_e", "gene_reaction_rule": ""}, {"subsystem": "Exchange", "name": "1-deoxy-D-xylulose Exchange", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["EX_dxyl_LPAREN_e_RPAREN_"]}, "metabolites": {"dxyl_e": -1.0}, "id": "EX_dxyl_e", "gene_reaction_rule": ""}, {"subsystem": "Exchange", "name": "3 Phospho D glycerate exchange", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["EX_3pg_LPAREN_e_RPAREN_"]}, "metabolites": {"3pg_e": -1.0}, "id": "EX_3pg_e", "gene_reaction_rule": ""}, {"subsystem": "Cofactor and Prosthetic Group Biosynthesis", "name": "Ribosylnicotinamide kinase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["RNMK"]}, "metabolites": {"rnam_c": -1.0, "nmn_c": 1.0, "h_c": 1.0, "atp_c": -1.0, "adp_c": 1.0}, "id": "RNMK", "gene_reaction_rule": "Z5991"}, {"subsystem": "Nucleotide Salvage Pathway", "name": "Uridylate kinase (dUMP)", "upper_bound": 1000.0, "lower_bound": -1000.0, "notes": {"original_bigg_ids": ["URIDK2r"]}, "metabolites": {"dump_c": -1.0, "adp_c": 1.0, "atp_c": -1.0, "dudp_c": 1.0}, "id": "URIDK2r", "gene_reaction_rule": "Z0182"}, {"subsystem": "Glutamate metabolism", "name": "Glutamate synthase (NADPH)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["GLUSy"]}, "metabolites": {"akg_c": -1.0, "nadp_c": 1.0, "nadph_c": -1.0, "glu__L_c": 2.0, "h_c": -1.0, "gln__L_c": -1.0}, "id": "GLUSy", "gene_reaction_rule": "Z4576 and Z4577"}, {"subsystem": "Alanine and Aspartate Metabolism", "name": "Valine-pyruvate aminotransferase", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["VPAMTr", "VPAMT"]}, "metabolites": {"pyr_c": 1.0, "3mob_c": -1.0, "ala__L_c": -1.0, "val__L_c": 1.0}, "id": "VPAMTr_copy2", "gene_reaction_rule": "Z4997"}, {"subsystem": "Membrane Lipid Metabolism", "name": "3-hydroxyacyl-CoA dehydrogenase (3-oxooctadecanoyl-CoA)", "upper_bound": 1000.0, "lower_bound": 0.0, "notes": {"original_bigg_ids": ["HACD8i"]}, "metabolites": {"3hodcoa_c": -1.0, "3oodcoa_c": 1.0, "nadh_c": 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{"original_bigg_ids": ["Z4210"]}, "name": "ygeX", "id": "Z4210"}, {"notes": {"original_bigg_ids": ["Z4156"]}, "name": "lysA", "id": "Z4156"}, {"notes": {"original_bigg_ids": ["Z5326"]}, "name": "dapF", "id": "Z5326"}, {"notes": {"original_bigg_ids": ["Z0186"]}, "name": "cdsA", "id": "Z0186"}, {"notes": {"original_bigg_ids": ["Z4399"]}, "name": "ribB", "id": "Z4399"}, {"notes": {"original_bigg_ids": ["Z0997"]}, "name": "bioD", "id": "Z0997"}, {"notes": {"original_bigg_ids": ["Z2764"]}, "name": "celF", "id": "Z2764"}, {"notes": {"original_bigg_ids": ["Z3233"]}, "name": "dcd", "id": "Z3233"}, {"notes": {"original_bigg_ids": ["Z3608"]}, "name": "fadL", "id": "Z3608"}, {"notes": {"original_bigg_ids": ["Z5454"]}, "name": "kdgT", "id": "Z5454"}, {"notes": {"original_bigg_ids": ["Z4940"]}, "name": "kdgK", "id": "Z4940"}, {"notes": {"original_bigg_ids": ["Z0924"]}, "name": "aroG", "id": "Z0924"}, {"notes": {"original_bigg_ids": ["Z2733"]}, "name": "aroH", "id": "Z2733"}, {"notes": 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{"original_bigg_ids": ["Z0055"]}, "name": "None", "id": "Z0055"}, {"notes": {"original_bigg_ids": ["Z3577"]}, "name": "folC", "id": "Z3577"}, {"notes": {"original_bigg_ids": ["Z5477"]}, "name": "menA", "id": "Z5477"}, {"notes": {"original_bigg_ids": ["Z3522"]}, "name": "menB", "id": "Z3522"}, {"notes": {"original_bigg_ids": ["Z0904"]}, "name": "ybgC", "id": "Z0904"}, {"notes": {"original_bigg_ids": ["Z4411"]}, "name": "ygiG", "id": "Z4411"}, {"notes": {"original_bigg_ids": ["Z1294"]}, "name": "pyrD", "id": "Z1294"}, {"notes": {"original_bigg_ids": ["Z1699"]}, "name": "pyrC", "id": "Z1699"}, {"notes": {"original_bigg_ids": ["Z4539"]}, "name": "folP", "id": "Z4539"}, {"notes": {"original_bigg_ids": ["Z0717"]}, "name": "nfnB", "id": "Z0717"}, {"notes": {"original_bigg_ids": ["Z3565"]}, "name": "folX", "id": "Z3565"}, {"notes": {"original_bigg_ids": ["Z4742"]}, "name": "aroB", "id": "Z4742"}, {"notes": {"original_bigg_ids": ["Z2721"]}, "name": "aroD", "id": "Z2721"}, {"notes": 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{"original_bigg_ids": ["Z5983"]}, "name": "deoC", "id": "Z5983"}, {"notes": {"original_bigg_ids": ["Z1948"]}, "name": "dsbB", "id": "Z1948"}, {"notes": {"original_bigg_ids": ["Z5392"]}, "name": "dsbA", "id": "Z5392"}, {"notes": {"original_bigg_ids": ["Z4231"]}, "name": "dsbC", "id": "Z4231"}, {"notes": {"original_bigg_ids": ["Z3867"]}, "name": "trxC", "id": "Z3867"}, {"notes": {"original_bigg_ids": ["Z5291"]}, "name": "trxA", "id": "Z5291"}, {"notes": {"original_bigg_ids": ["Z5741"]}, "name": "dsbD", "id": "Z5741"}, {"notes": {"original_bigg_ids": ["Z0748"]}, "name": "dsbG", "id": "Z0748"}, {"notes": {"original_bigg_ids": ["Z2615"]}, "name": "fumA", "id": "Z2615"}, {"notes": {"original_bigg_ids": ["Z1737"]}, "name": "tmk", "id": "Z1737"}, {"notes": {"original_bigg_ids": ["Z3402"]}, "name": "yeiA", "id": "Z3402"}, {"notes": {"original_bigg_ids": ["Z3401"]}, "name": "None", "id": "Z3401"}, {"notes": {"original_bigg_ids": ["Z2015"]}, "name": "tdk", "id": "Z2015"}, {"notes": 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{"original_bigg_ids": ["Z1044"]}, "name": "None", "id": "Z1044"}, {"notes": {"original_bigg_ids": ["Z5156"]}, "name": "uhpT", "id": "Z5156"}, {"notes": {"original_bigg_ids": ["Z0503"]}, "name": "yajB", "id": "Z0503"}, {"notes": {"original_bigg_ids": ["Z0564"]}, "name": "tesB", "id": "Z0564"}, {"notes": {"original_bigg_ids": ["Z2730"]}, "name": "ydiD", "id": "Z2730"}, {"notes": {"original_bigg_ids": ["Z2848"]}, "name": "fadD", "id": "Z2848"}, {"notes": {"original_bigg_ids": ["Z5365"]}, "name": "ubiB", "id": "Z5365"}, {"notes": {"original_bigg_ids": ["Z4073"]}, "name": "cysI", "id": "Z4073"}, {"notes": {"original_bigg_ids": ["Z4074"]}, "name": "cysJ", "id": "Z4074"}, {"notes": {"original_bigg_ids": ["Z2811"]}, "name": "None", "id": "Z2811"}, {"notes": {"original_bigg_ids": ["Z4263"]}, "name": "fba", "id": "Z4263"}, {"notes": {"original_bigg_ids": ["Z3260"]}, "name": "None", "id": "Z3260"}, {"notes": {"original_bigg_ids": ["Z4275"]}, "name": "yggF", "id": "Z4275"}, {"notes": 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{"original_bigg_ids": ["Z3658"]}, "name": "None", "id": "Z3658"}, {"notes": {"original_bigg_ids": ["Z0729"]}, "name": "fepC", "id": "Z0729"}, {"notes": {"original_bigg_ids": ["Z0734"]}, "name": "fepB", "id": "Z0734"}, {"notes": {"original_bigg_ids": ["Z0731"]}, "name": "fepG", "id": "Z0731"}, {"notes": {"original_bigg_ids": ["Z0732"]}, "name": "fepD", "id": "Z0732"}, {"notes": {"original_bigg_ids": ["Z1026"]}, "name": "None", "id": "Z1026"}, {"notes": {"original_bigg_ids": ["Z3411"]}, "name": "cirA", "id": "Z3411"}, {"notes": {"original_bigg_ids": ["Z0161"]}, "name": "fhuA", "id": "Z0161"}, {"notes": {"original_bigg_ids": ["Z0724"]}, "name": "fepA", "id": "Z0724"}, {"notes": {"original_bigg_ids": ["Z0733"]}, "name": "ybdA", "id": "Z0733"}, {"notes": {"original_bigg_ids": ["Z5968"]}, "name": "fhuF", "id": "Z5968"}, {"notes": {"original_bigg_ids": ["Z5820"]}, "name": "ytfE", "id": "Z5820"}, {"notes": {"original_bigg_ids": ["Z3744"]}, "name": "hyfD", "id": "Z3744"}, {"notes": 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{"original_bigg_ids": ["Z5760"]}, "name": "frdB", "id": "Z5760"}, {"notes": {"original_bigg_ids": ["Z5758"]}, "name": "frdD", "id": "Z5758"}, {"notes": {"original_bigg_ids": ["Z5762"]}, "name": "frdA", "id": "Z5762"}, {"notes": {"original_bigg_ids": ["Z3426"]}, "name": "fruK", "id": "Z3426"}, {"notes": {"original_bigg_ids": ["Z4732"]}, "name": "yhfN", "id": "Z4732"}, {"notes": {"original_bigg_ids": ["Z4733"]}, "name": "None", "id": "Z4733"}, {"notes": {"original_bigg_ids": ["Z4734m"]}, "name": "None", "id": "Z4734m"}, {"notes": {"original_bigg_ids": ["Z4731"]}, "name": "yhfM", "id": "Z4731"}, {"notes": {"original_bigg_ids": ["Z5919"]}, "name": "gntP", "id": "Z5919"}, {"notes": {"original_bigg_ids": ["Z3425"]}, "name": "fruA", "id": "Z3425"}, {"notes": {"original_bigg_ids": ["Z3427"]}, "name": "fruB", "id": "Z3427"}, {"notes": {"original_bigg_ids": ["Z2008"]}, "name": "purU", "id": "Z2008"}, {"notes": {"original_bigg_ids": ["Z4118"]}, "name": "fucP", "id": "Z4118"}, {"notes": 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{"original_bigg_ids": ["Z5024"]}, "name": "mtlD", "id": "Z5024"}, {"notes": {"original_bigg_ids": ["Z0996"]}, "name": "bioC", "id": "Z0996"}, {"notes": {"original_bigg_ids": ["Z2843"]}, "name": "yeaU", "id": "Z2843"}, {"notes": {"original_bigg_ids": ["Z5600"]}, "name": "aceB", "id": "Z5600"}, {"notes": {"original_bigg_ids": ["Z3213"]}, "name": "cpsB", "id": "Z3213"}, {"notes": {"original_bigg_ids": ["Z2616"]}, "name": "manA", "id": "Z2616"}, {"notes": {"original_bigg_ids": ["Z5921"]}, "name": "uxuB", "id": "Z5921"}, {"notes": {"original_bigg_ids": ["Z0429"]}, "name": "prpD", "id": "Z0429"}, {"notes": {"original_bigg_ids": ["Z0427"]}, "name": "prpB", "id": "Z0427"}, {"notes": {"original_bigg_ids": ["Z0428"]}, "name": "prpC", "id": "Z0428"}, {"notes": {"original_bigg_ids": ["Z1731"]}, "name": "fabD", "id": "Z1731"}, {"notes": {"original_bigg_ids": ["Z3788"]}, "name": "sseA", "id": "Z3788"}, {"notes": {"original_bigg_ids": ["Z0160"]}, "name": "mrcB", "id": "Z0160"}, {"notes": {"original_bigg_ids": ["Z4750"]}, "name": "mrcA", "id": "Z4750"}, {"notes": {"original_bigg_ids": ["Z0781"]}, "name": "mrdA", "id": "Z0781"}, {"notes": {"original_bigg_ids": ["Z0094"]}, "name": "ftsI", "id": "Z0094"}, {"notes": {"original_bigg_ids": ["Z4544"]}, "name": "dacB", "id": "Z4544"}, {"notes": {"original_bigg_ids": ["Z1066"]}, "name": "dacC", "id": "Z1066"}, {"notes": {"original_bigg_ids": ["Z3171"]}, "name": "dacD", "id": "Z3171"}, {"notes": {"original_bigg_ids": ["Z0777"]}, "name": "dacA", "id": "Z0777"}, {"notes": {"original_bigg_ids": ["Z3591"]}, "name": "mepA", "id": "Z3591"}, {"notes": {"original_bigg_ids": ["Z3383"]}, "name": "pbpG", "id": "Z3383"}, {"notes": {"original_bigg_ids": ["Z4595"]}, "name": "mdh", "id": "Z4595"}, {"notes": {"original_bigg_ids": ["Z3468"]}, "name": "yojH", "id": "Z3468"}, {"notes": {"original_bigg_ids": ["Z2231"]}, "name": "sfcA", "id": "Z2231"}, {"notes": {"original_bigg_ids": ["Z3719"]}, "name": "None", "id": "Z3719"}, {"notes": {"original_bigg_ids": ["Z3778"]}, "name": "gcpE", "id": "Z3778"}, {"notes": {"original_bigg_ids": ["Z4054"]}, "name": "ygbB", "id": "Z4054"}, {"notes": {"original_bigg_ids": ["Z5722"]}, "name": "melB", "id": "Z5722"}, {"notes": {"original_bigg_ids": ["Z4055"]}, "name": "ygbP", "id": "Z4055"}, {"notes": {"original_bigg_ids": ["Z4287"]}, "name": "metK", "id": "Z4287"}, {"notes": {"original_bigg_ids": ["Z0211"]}, "name": "abc", "id": "Z0211"}, {"notes": {"original_bigg_ids": ["Z0209"]}, "name": "yaeC", "id": "Z0209"}, {"notes": {"original_bigg_ids": ["Z0210"]}, "name": "yaeE", "id": "Z0210"}, {"notes": {"original_bigg_ids": ["Z5610"]}, "name": "metH", "id": "Z5610"}, {"notes": {"original_bigg_ids": ["Z5351"]}, "name": "metE", "id": "Z5351"}, {"notes": {"original_bigg_ids": ["Z5830"]}, "name": "msrA", "id": "Z5830"}, {"notes": {"original_bigg_ids": ["Z2817"]}, "name": "yeaA", "id": "Z2817"}, {"notes": {"original_bigg_ids": ["Z3282"]}, "name": "metG", "id": "Z3282"}, {"notes": {"original_bigg_ids": ["Z5853"]}, "name": "mgtA", "id": "Z5853"}, {"notes": {"original_bigg_ids": ["Z1314"]}, "name": "mgsA", "id": "Z1314"}, {"notes": {"original_bigg_ids": ["Z0501"]}, "name": "malZ", "id": "Z0501"}, {"notes": {"original_bigg_ids": ["Z5994"]}, "name": "slt", "id": "Z5994"}, {"notes": {"original_bigg_ids": ["Z1956"]}, "name": "mltE", "id": "Z1956"}, {"notes": {"original_bigg_ids": ["Z3838"]}, "name": "yfhD", "id": "Z3838"}, {"notes": {"original_bigg_ids": ["Z4004"]}, "name": "mltB", "id": "Z4004"}, {"notes": {"original_bigg_ids": ["Z4308"]}, "name": "mltC", "id": "Z4308"}, {"notes": {"original_bigg_ids": ["Z4130"]}, "name": "mltA", "id": "Z4130"}, {"notes": {"original_bigg_ids": ["Z4256"]}, "name": "ygfG", "id": "Z4256"}, {"notes": {"original_bigg_ids": ["Z4254"]}, "name": "sbm", "id": "Z4254"}, {"notes": {"original_bigg_ids": ["Z5023"]}, "name": "mtlA", "id": "Z5023"}, {"notes": {"original_bigg_ids": ["Z5920"]}, "name": "uxuA", "id": "Z5920"}, {"notes": {"original_bigg_ids": ["Z1003"]}, "name": "moaD", "id": "Z1003"}, {"notes": {"original_bigg_ids": ["Z5057"]}, "name": "kdtA", "id": "Z5057"}, {"notes": {"original_bigg_ids": ["Z5462"]}, "name": "sbp", "id": "Z5462"}, {"notes": {"original_bigg_ids": ["Z0935"]}, "name": "modC", "id": "Z0935"}, {"notes": {"original_bigg_ids": ["Z3690"]}, "name": "cysP", "id": "Z3690"}, {"notes": {"original_bigg_ids": ["Z3687"]}, "name": "cysA", "id": "Z3687"}, {"notes": {"original_bigg_ids": ["Z3688m"]}, "name": "None", "id": "Z3688m"}, {"notes": {"original_bigg_ids": ["Z3689"]}, "name": "cysU", "id": "Z3689"}, {"notes": {"original_bigg_ids": ["Z0933"]}, "name": "modA", "id": "Z0933"}, {"notes": {"original_bigg_ids": ["Z0934"]}, "name": "modB", "id": "Z0934"}, {"notes": {"original_bigg_ids": ["Z4216"]}, "name": "ygfJ", "id": "Z4216"}, {"notes": {"original_bigg_ids": ["Z0145"]}, "name": "panB", "id": "Z0145"}, {"notes": {"original_bigg_ids": ["Z0009"]}, "name": "mog", "id": "Z0009"}, {"notes": {"original_bigg_ids": ["Z1707"]}, "name": "mviN", "id": "Z1707"}, {"notes": {"original_bigg_ids": ["Z3786"]}, "name": "pbpC", "id": "Z3786"}, {"notes": {"original_bigg_ids": ["Z1004"]}, "name": "moaE", "id": "Z1004"}, {"notes": {"original_bigg_ids": ["Z1049"]}, "name": "moeB", "id": "Z1049"}, {"notes": {"original_bigg_ids": ["Z1507"]}, "name": "None", "id": "Z1507"}, {"notes": {"original_bigg_ids": ["Z0684"]}, "name": "folD", "id": "Z0684"}, {"notes": {"original_bigg_ids": ["Z5496"]}, "name": "metF", "id": "Z5496"}, {"notes": {"original_bigg_ids": ["Z1696"]}, "name": "solA", "id": "Z1696"}, {"notes": {"original_bigg_ids": ["Z3677"]}, "name": "lig", "id": "Z3677"}, {"notes": {"original_bigg_ids": ["Z5571"]}, "name": "yjaD", "id": "Z5571"}, {"notes": {"original_bigg_ids": ["Z1748"]}, "name": "ndh", "id": "Z1748"}, {"notes": {"original_bigg_ids": ["Z3547"]}, "name": "nuoA", "id": "Z3547"}, {"notes": {"original_bigg_ids": ["Z3537"]}, "name": "nuoL", "id": "Z3537"}, {"notes": {"original_bigg_ids": ["Z3534"]}, "name": "nuoN", "id": "Z3534"}, {"notes": {"original_bigg_ids": ["Z3545"]}, "name": "nuoC", "id": "Z3545"}, {"notes": {"original_bigg_ids": ["Z3541"]}, "name": "nuoH", "id": "Z3541"}, {"notes": {"original_bigg_ids": ["Z3540"]}, "name": "nuoI", "id": "Z3540"}, {"notes": {"original_bigg_ids": ["Z3536"]}, "name": "nuoM", "id": "Z3536"}, {"notes": {"original_bigg_ids": ["Z3539"]}, "name": "nuoJ", "id": "Z3539"}, {"notes": {"original_bigg_ids": ["Z3546"]}, "name": "nuoB", "id": "Z3546"}, {"notes": {"original_bigg_ids": ["Z3538"]}, "name": "nuoK", "id": "Z3538"}, {"notes": {"original_bigg_ids": ["Z3544"]}, "name": "nuoE", "id": "Z3544"}, {"notes": {"original_bigg_ids": ["Z3542"]}, "name": "nuoG", "id": "Z3542"}, {"notes": {"original_bigg_ids": ["Z3543"]}, "name": "nuoF", "id": "Z3543"}, {"notes": {"original_bigg_ids": ["Z3908"]}, "name": "yfjB", "id": "Z3908"}, {"notes": {"original_bigg_ids": ["Z4379"]}, "name": "mdaB", "id": "Z4379"}, {"notes": {"original_bigg_ids": ["Z2770"]}, "name": "nadE", "id": "Z2770"}, {"notes": {"original_bigg_ids": ["Z2597"]}, "name": "pntB", "id": "Z2597"}, {"notes": {"original_bigg_ids": ["Z2600"]}, "name": "pntA", "id": "Z2600"}, {"notes": {"original_bigg_ids": ["Z5521"]}, "name": "udhA", "id": "Z5521"}, {"notes": {"original_bigg_ids": ["Z1279"]}, "name": "pncB", "id": "Z1279"}, {"notes": {"original_bigg_ids": ["Z1949"]}, "name": "nhaB", "id": "Z1949"}, {"notes": {"original_bigg_ids": ["Z0018"]}, "name": "nhaA", "id": "Z0018"}, {"notes": {"original_bigg_ids": ["Z3781"]}, "name": "ndk", "id": "Z3781"}, {"notes": {"original_bigg_ids": ["Z0563"]}, "name": "amtB", "id": "Z0563"}, {"notes": {"original_bigg_ids": ["Z4019"]}, "name": "ygbD", "id": "Z4019"}, {"notes": {"original_bigg_ids": ["Z4018"]}, "name": "None", "id": "Z4018"}, {"notes": {"original_bigg_ids": ["Z4870"]}, "name": "nikC", "id": "Z4870"}, {"notes": {"original_bigg_ids": ["Z4868"]}, "name": "nikA", "id": "Z4868"}, {"notes": {"original_bigg_ids": ["Z4872"]}, "name": "nikE", "id": "Z4872"}, {"notes": {"original_bigg_ids": ["Z4871"]}, "name": "nikD", "id": "Z4871"}, {"notes": {"original_bigg_ids": ["Z4869"]}, "name": "nikB", "id": "Z4869"}, {"notes": {"original_bigg_ids": ["Z5991"]}, "name": "nadR", "id": "Z5991"}, {"notes": {"original_bigg_ids": ["Z0786"]}, "name": "ybeN", "id": "Z0786"}, {"notes": {"original_bigg_ids": ["Z0920"]}, "name": "pnuC", "id": "Z0920"}, {"notes": {"original_bigg_ids": ["Z2802"]}, "name": "ydjB", "id": "Z2802"}, {"notes": {"original_bigg_ids": ["Z3151"]}, "name": "cobT", "id": "Z3151"}, {"notes": {"original_bigg_ids": ["Z0119"]}, "name": "nadC", "id": "Z0119"}, {"notes": {"original_bigg_ids": ["Z2000"]}, "name": "narK", "id": "Z2000"}, {"notes": {"original_bigg_ids": ["Z4728m"]}, "name": "None", "id": "Z4728m"}, {"notes": {"original_bigg_ids": ["Z3463"]}, "name": "napA", "id": "Z3463"}, {"notes": {"original_bigg_ids": ["Z3462"]}, "name": "napG", "id": "Z3462"}, {"notes": {"original_bigg_ids": ["Z3460"]}, "name": "napB", "id": "Z3460"}, {"notes": {"original_bigg_ids": ["Z3461"]}, "name": "napH", "id": "Z3461"}, {"notes": {"original_bigg_ids": ["Z3459"]}, "name": "napC", "id": "Z3459"}, {"notes": {"original_bigg_ids": ["Z2002"]}, "name": "narH", "id": "Z2002"}, {"notes": {"original_bigg_ids": ["Z2004"]}, "name": "narI", "id": "Z2004"}, {"notes": {"original_bigg_ids": ["Z2001"]}, "name": "narG", "id": "Z2001"}, {"notes": {"original_bigg_ids": ["Z2003"]}, "name": "narJ", "id": "Z2003"}, {"notes": {"original_bigg_ids": ["Z2247"]}, "name": "narV", "id": "Z2247"}, {"notes": {"original_bigg_ids": ["Z2246"]}, "name": "narW", "id": "Z2246"}, {"notes": {"original_bigg_ids": ["Z3828"]}, "name": "hmpA", "id": "Z3828"}, {"notes": {"original_bigg_ids": ["Z3552"]}, "name": "None", "id": "Z3552"}, {"notes": {"original_bigg_ids": ["Z4052"]}, "name": "surE", "id": "Z4052"}, {"notes": {"original_bigg_ids": ["Z5975"]}, "name": "yjjG", "id": "Z5975"}, {"notes": {"original_bigg_ids": ["Z0599"]}, "name": "ushA", "id": "Z0599"}, {"notes": {"original_bigg_ids": ["Z5767"]}, "name": "yjeQ", "id": "Z5767"}, {"notes": {"original_bigg_ids": ["Z0800"]}, "name": "ybeW", "id": "Z0800"}, {"notes": {"original_bigg_ids": ["Z5996"]}, "name": "yjjX", "id": "Z5996"}, {"notes": {"original_bigg_ids": ["Z1397"]}, "name": "appA", "id": "Z1397"}, {"notes": {"original_bigg_ids": ["Z4096"]}, "name": "mazG", "id": "Z4096"}, {"notes": {"original_bigg_ids": ["Z4299"]}, "name": "yggV", "id": "Z4299"}, {"notes": {"original_bigg_ids": ["Z2791"]}, "name": "None", "id": "Z2791"}, {"notes": {"original_bigg_ids": ["Z0171"]}, "name": "dgt", "id": "Z0171"}, {"notes": {"original_bigg_ids": ["Z4726"]}, "name": "nirB", "id": "Z4726"}, {"notes": {"original_bigg_ids": ["Z4727"]}, "name": "nirD", "id": "Z4727"}, {"notes": {"original_bigg_ids": ["Z5671"]}, "name": "nrfC", "id": "Z5671"}, {"notes": {"original_bigg_ids": ["Z5672"]}, "name": "nrfD", "id": "Z5672"}, {"notes": {"original_bigg_ids": ["Z5669"]}, "name": "nrfA", "id": "Z5669"}, {"notes": {"original_bigg_ids": ["Z5670"]}, "name": "nrfB", "id": "Z5670"}, {"notes": {"original_bigg_ids": ["wbbJ"]}, "name": "None", "id": "wbbJ"}, {"notes": {"original_bigg_ids": ["Z4466"]}, "name": "tdcE", "id": "Z4466"}, {"notes": {"original_bigg_ids": ["Z1248"]}, "name": "pflB", "id": "Z1248"}, {"notes": {"original_bigg_ids": ["Z1246"]}, "name": "pflA", "id": "Z1246"}, {"notes": {"original_bigg_ids": ["Z3862"]}, "name": "yfiD", "id": "Z3862"}, {"notes": {"original_bigg_ids": ["Z5866"]}, "name": "argI", "id": "Z5866"}, {"notes": {"original_bigg_ids": ["Z4550"]}, "name": "ispB", "id": "Z4550"}, {"notes": {"original_bigg_ids": ["Z1253"]}, "name": "serC", "id": "Z1253"}, {"notes": {"original_bigg_ids": ["Z0811"]}, "name": "yleB", "id": "Z0811"}, {"notes": {"original_bigg_ids": ["Z2525"]}, "name": "pyrF", "id": "Z2525"}, {"notes": {"original_bigg_ids": ["Z4244"]}, "name": "ubiH", "id": "Z4244"}, {"notes": {"original_bigg_ids": ["Z0448"]}, "name": "mhpD", "id": "Z0448"}, {"notes": {"original_bigg_ids": ["Z5364"]}, "name": "yigC", "id": "Z5364"}, {"notes": {"original_bigg_ids": ["Z3573"]}, "name": "ubiX", "id": "Z3573"}, {"notes": {"original_bigg_ids": ["Z5357"]}, "name": "yigR", "id": "Z5357"}, {"notes": {"original_bigg_ids": ["Z4310"]}, "name": "speC", "id": "Z4310"}, {"notes": {"original_bigg_ids": ["Z5066"]}, "name": "pyrE", "id": "Z5066"}, {"notes": {"original_bigg_ids": ["Z3637"]}, "name": "None", "id": "Z3637"}, {"notes": {"original_bigg_ids": ["Z1513"]}, "name": "putA", "id": "Z1513"}, {"notes": {"original_bigg_ids": ["Z0482"]}, "name": "proC", "id": "Z0482"}, {"notes": {"original_bigg_ids": ["Z0144"]}, "name": "panC", "id": "Z0144"}, {"notes": {"original_bigg_ids": ["Z2529"]}, "name": "pgpB", "id": "Z2529"}, {"notes": {"original_bigg_ids": ["Z0097"]}, "name": "mraY", "id": "Z0097"}, {"notes": {"original_bigg_ids": ["Z4072"]}, "name": "cysH", "id": "Z4072"}, {"notes": {"original_bigg_ids": ["Z2221m"]}, "name": "None", "id": "Z2221m"}, {"notes": {"original_bigg_ids": ["Z0124"]}, "name": "aceE", "id": "Z0124"}, {"notes": {"original_bigg_ids": ["Z0125"]}, "name": "aceF", "id": "Z0125"}, {"notes": {"original_bigg_ids": ["Z2652"]}, "name": "pdxH", "id": "Z2652"}, {"notes": {"original_bigg_ids": ["Z3845"]}, "name": "pdxJ", "id": "Z3845"}, {"notes": {"original_bigg_ids": ["Z0061"]}, "name": "pdxA", "id": "Z0061"}, {"notes": {"original_bigg_ids": ["Z0936"]}, "name": "ybhA", "id": "Z0936"}, {"notes": {"original_bigg_ids": ["Z3582"]}, "name": "pdxB", "id": "Z3582"}, {"notes": {"original_bigg_ids": ["Z4964"]}, "name": "yhjW", "id": "Z4964"}, {"notes": {"original_bigg_ids": ["Z5460"]}, "name": "pfkA", "id": "Z5460"}, {"notes": {"original_bigg_ids": ["Z2752"]}, "name": "pfkB", "id": "Z2752"}, {"notes": {"original_bigg_ids": ["Z5508"]}, "name": "pflC", "id": "Z5508"}, {"notes": {"original_bigg_ids": ["Z5507"]}, "name": "pflD", "id": "Z5507"}, {"notes": {"original_bigg_ids": ["Z4538"]}, "name": "mrsA", "id": "Z4538"}, {"notes": {"original_bigg_ids": ["Z4251"]}, "name": "serA", "id": "Z4251"}, {"notes": {"original_bigg_ids": ["Z5623"]}, "name": "pgi", "id": "Z5623"}, {"notes": {"original_bigg_ids": ["Z4265"]}, "name": "pgk", "id": "Z4265"}, {"notes": {"original_bigg_ids": ["Z0938"]}, "name": "ybhE", "id": "Z0938"}, {"notes": {"original_bigg_ids": ["Z4738"]}, "name": "gph", "id": "Z4738"}, {"notes": {"original_bigg_ids": ["Z0925"]}, "name": "gpmA", "id": "Z0925"}, {"notes": {"original_bigg_ids": ["Z5997"]}, "name": "gpmB", "id": "Z5997"}, {"notes": {"original_bigg_ids": ["Z5039"]}, "name": "yibO", "id": "Z5039"}, {"notes": {"original_bigg_ids": ["Z3991"]}, "name": "yqaB", "id": "Z3991"}, {"notes": {"original_bigg_ids": ["Z0837"]}, "name": "pgm", "id": "Z0837"}, {"notes": {"original_bigg_ids": ["Z0520"]}, "name": "pgpA", "id": "Z0520"}, {"notes": {"original_bigg_ids": ["Z3000"]}, "name": "pgsA", "id": "Z3000"}, {"notes": {"original_bigg_ids": ["Z3458"]}, "name": "ccmA", "id": "Z3458"}, {"notes": {"original_bigg_ids": ["Z3456"]}, "name": "ccmC", "id": "Z3456"}, {"notes": {"original_bigg_ids": ["Z3455"]}, "name": "ccmD", "id": "Z3455"}, {"notes": {"original_bigg_ids": ["Z3457"]}, "name": "ccmB", "id": "Z3457"}, {"notes": {"original_bigg_ids": ["Z3454"]}, "name": "ccmE", "id": "Z3454"}, {"notes": {"original_bigg_ids": ["Z2742"]}, "name": "pheT", "id": "Z2742"}, {"notes": {"original_bigg_ids": ["Z2743"]}, "name": "pheS", "id": "Z2743"}, {"notes": {"original_bigg_ids": ["Z0715"]}, "name": "pheP", "id": "Z0715"}, {"notes": {"original_bigg_ids": ["Z2238"]}, "name": "yddG", "id": "Z2238"}, {"notes": {"original_bigg_ids": ["Z4893"]}, "name": "pitA", "id": "Z4893"}, {"notes": {"original_bigg_ids": ["Z4341"]}, "name": "pitB", "id": "Z4341"}, {"notes": {"original_bigg_ids": ["Z5216"]}, "name": "pstB", "id": "Z5216"}, {"notes": {"original_bigg_ids": ["Z5218"]}, "name": "pstC", "id": "Z5218"}, {"notes": {"original_bigg_ids": ["Z5217"]}, "name": "pstA", "id": "Z5217"}, {"notes": {"original_bigg_ids": ["Z5219"]}, "name": "pstS", "id": "Z5219"}, {"notes": {"original_bigg_ids": ["Z5342"]}, "name": "pldA", "id": "Z5342"}, {"notes": {"original_bigg_ids": ["Z3212"]}, "name": "cpsG", "id": "Z3212"}, {"notes": {"original_bigg_ids": ["Z4767"]}, "name": "bioH", "id": "Z4767"}, {"notes": {"original_bigg_ids": ["Z5545"]}, "name": "coaA", "id": "Z5545"}, {"notes": {"original_bigg_ids": ["Z4618"]}, "name": "panF", "id": "Z4618"}, {"notes": {"original_bigg_ids": ["Z1509"]}, "name": "None", "id": "Z1509"}, {"notes": {"original_bigg_ids": ["Z2332"]}, "name": "ydbK", "id": "Z2332"}, {"notes": {"original_bigg_ids": ["Z1105"]}, "name": "poxB", "id": "Z1105"}, {"notes": {"original_bigg_ids": ["Z5837"]}, "name": "ppa", "id": "Z5837"}, {"notes": {"original_bigg_ids": ["Z3765"]}, "name": "ppx", "id": "Z3765"}, {"notes": {"original_bigg_ids": ["Z1515"]}, "name": "putP", "id": "Z1515"}, {"notes": 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{"original_bigg_ids": ["Z3188"]}, "name": "hisI", "id": "Z3188"}, {"notes": {"original_bigg_ids": ["Z3735"]}, "name": "purC", "id": "Z3735"}, {"notes": {"original_bigg_ids": ["Z3835"]}, "name": "purL", "id": "Z3835"}, {"notes": {"original_bigg_ids": ["Z3186"]}, "name": "hisA", "id": "Z3186"}, {"notes": {"original_bigg_ids": ["Z0206"]}, "name": "proS", "id": "Z0206"}, {"notes": {"original_bigg_ids": ["Z1978"]}, "name": "prsA", "id": "Z1978"}, {"notes": {"original_bigg_ids": ["Z1254"]}, "name": "aroA", "id": "Z1254"}, {"notes": {"original_bigg_ids": ["Z5766"]}, "name": "None", "id": "Z5766"}, {"notes": {"original_bigg_ids": ["Z5989"]}, "name": "serB", "id": "Z5989"}, {"notes": {"original_bigg_ids": ["Z3870"]}, "name": "pssA", "id": "Z3870"}, {"notes": {"original_bigg_ids": ["Z3559"]}, "name": "pta", "id": "Z3559"}, {"notes": {"original_bigg_ids": ["Z3714"]}, "name": "eutI", "id": "Z3714"}, {"notes": {"original_bigg_ids": ["Z5058"]}, "name": "kdtB", "id": "Z5058"}, {"notes": {"original_bigg_ids": ["Z0838"]}, "name": "potE", "id": "Z0838"}, {"notes": {"original_bigg_ids": ["Z4426"]}, "name": "ygjG", "id": "Z4426"}, {"notes": {"original_bigg_ids": ["Z1083"]}, "name": "potH", "id": "Z1083"}, {"notes": {"original_bigg_ids": ["Z2276"]}, "name": "None", "id": "Z2276"}, {"notes": {"original_bigg_ids": ["Z1762"]}, "name": "potD", "id": "Z1762"}, {"notes": {"original_bigg_ids": ["Z1081"]}, "name": "potF", "id": "Z1081"}, {"notes": {"original_bigg_ids": ["Z1763"]}, "name": "potC", "id": "Z1763"}, {"notes": {"original_bigg_ids": ["Z1831"]}, "name": "potA", "id": "Z1831"}, {"notes": {"original_bigg_ids": ["Z1084"]}, "name": "potI", "id": "Z1084"}, {"notes": {"original_bigg_ids": ["Z2277"]}, "name": "None", "id": "Z2277"}, {"notes": {"original_bigg_ids": ["Z2278"]}, "name": "None", "id": "Z2278"}, {"notes": {"original_bigg_ids": ["Z1830"]}, "name": "potB", "id": "Z1830"}, {"notes": {"original_bigg_ids": ["Z1082"]}, "name": "potG", "id": "Z1082"}, {"notes": {"original_bigg_ids": ["Z2279"]}, "name": "None", "id": "Z2279"}, {"notes": {"original_bigg_ids": ["Z2492"]}, "name": "ycjJ", "id": "Z2492"}, {"notes": {"original_bigg_ids": ["Z2648"]}, "name": "pdxY", "id": "Z2648"}, {"notes": {"original_bigg_ids": ["Z5347"]}, "name": "None", "id": "Z5347"}, {"notes": {"original_bigg_ids": ["Z2704"]}, "name": "pykF", "id": "Z2704"}, {"notes": {"original_bigg_ids": ["Z2906"]}, "name": "pykA", "id": "Z2906"}, {"notes": {"original_bigg_ids": ["Z5353"]}, "name": "udp", "id": "Z5353"}, {"notes": {"original_bigg_ids": ["Z1506"]}, "name": "None", "id": "Z1506"}, {"notes": {"original_bigg_ids": ["Z1511"]}, "name": "None", "id": "Z1511"}, {"notes": {"original_bigg_ids": ["Z4380"]}, "name": "ygiN", "id": "Z4380"}, {"notes": {"original_bigg_ids": ["Z2720"]}, "name": "ydiB", "id": "Z2720"}, {"notes": {"original_bigg_ids": ["Z0919"]}, "name": "nadA", "id": "Z0919"}, {"notes": {"original_bigg_ids": ["Z5697"]}, "name": "phnN", "id": "Z5697"}, {"notes": {"original_bigg_ids": ["Z2688"]}, "name": "ribE", "id": "Z2688"}, {"notes": {"original_bigg_ids": ["Z0516"]}, "name": "None", "id": "Z0516"}, {"notes": {"original_bigg_ids": ["Z5253"]}, "name": "rbsK", "id": "Z5253"}, {"notes": {"original_bigg_ids": ["Z0072"]}, "name": "araB", "id": "Z0072"}, {"notes": {"original_bigg_ids": ["Z5807"]}, "name": "sgaE", "id": "Z5807"}, {"notes": {"original_bigg_ids": ["Z0069"]}, "name": "araD", "id": "Z0069"}, {"notes": {"original_bigg_ids": ["Z3988"]}, "name": "ygaG", "id": "Z3988"}, {"notes": {"original_bigg_ids": ["Z5249"]}, "name": "rbsD", "id": "Z5249"}, {"notes": {"original_bigg_ids": ["Z5251"]}, "name": "rbsC", "id": "Z5251"}, {"notes": {"original_bigg_ids": ["Z5250"]}, "name": "rbsA", "id": "Z5250"}, {"notes": {"original_bigg_ids": ["Z5252"]}, "name": "rbsB", "id": "Z5252"}, {"notes": {"original_bigg_ids": ["Z5448"]}, "name": "rhaB", "id": "Z5448"}, {"notes": {"original_bigg_ids": ["Z5446"]}, "name": "rhaD", "id": "Z5446"}, {"notes": {"original_bigg_ids": ["Z3489"]}, "name": "nrdA", "id": "Z3489"}, {"notes": {"original_bigg_ids": ["Z3491"]}, "name": "nrdB", "id": "Z3491"}, {"notes": {"original_bigg_ids": ["Z3977"]}, "name": "nrdE", "id": "Z3977"}, {"notes": {"original_bigg_ids": ["Z3978"]}, "name": "nrdF", "id": "Z3978"}, {"notes": {"original_bigg_ids": ["Z5848"]}, "name": "nrdD", "id": "Z5848"}, {"notes": {"original_bigg_ids": ["Z5847"]}, "name": "nrdG", "id": "Z5847"}, {"notes": {"original_bigg_ids": ["Z4739"]}, "name": "rpe", "id": "Z4739"}, {"notes": {"original_bigg_ids": ["Z4252"]}, "name": "rpiA", "id": "Z4252"}, {"notes": {"original_bigg_ids": ["Z0785"]}, "name": "phpB", "id": "Z0785"}, {"notes": {"original_bigg_ids": ["Z2709"]}, "name": "ynhC", "id": "Z2709"}, {"notes": {"original_bigg_ids": ["Z2710"]}, "name": "ynhD", "id": "Z2710"}, {"notes": {"original_bigg_ids": ["Z2708"]}, "name": "None", "id": "Z2708"}, {"notes": {"original_bigg_ids": ["Z2707"]}, "name": "ynhA", "id": "Z2707"}, {"notes": {"original_bigg_ids": ["Z2711"]}, "name": "ynhE", "id": "Z2711"}, {"notes": {"original_bigg_ids": ["Z2712"]}, "name": "ydiC", "id": "Z2712"}, {"notes": {"original_bigg_ids": ["Z0280"]}, "name": "gmhA", "id": "Z0280"}, {"notes": {"original_bigg_ids": ["Z2777"]}, "name": "None", "id": "Z2777"}, {"notes": {"original_bigg_ids": ["Z4059"]}, "name": "cysN", "id": "Z4059"}, {"notes": {"original_bigg_ids": ["Z4060"]}, "name": "cysD", "id": "Z4060"}, {"notes": {"original_bigg_ids": ["Z4012"]}, "name": "srlD", "id": "Z4012"}, {"notes": {"original_bigg_ids": ["Z4006"]}, "name": "srlA_2", "id": "Z4006"}, {"notes": {"original_bigg_ids": ["Z4011"]}, "name": "srlB", "id": "Z4011"}, {"notes": {"original_bigg_ids": ["Z4009"]}, "name": "srlE_2", "id": "Z4009"}, {"notes": {"original_bigg_ids": ["Z3730"]}, "name": "dapE", "id": "Z3730"}, {"notes": {"original_bigg_ids": ["Z5012"]}, "name": "selA", "id": "Z5012"}, {"notes": {"original_bigg_ids": ["Z2797"]}, "name": "selD", "id": "Z2797"}, {"notes": {"original_bigg_ids": ["Z3524"]}, "name": "menD", "id": "Z3524"}, {"notes": {"original_bigg_ids": ["Z0727"]}, "name": "entF", "id": "Z0727"}, {"notes": {"original_bigg_ids": ["Z5034"]}, "name": "cysE", "id": "Z5034"}, {"notes": {"original_bigg_ids": ["Z3628"]}, "name": "dsdA", "id": "Z3628"}, {"notes": {"original_bigg_ids": ["Z4464"]}, "name": "None", "id": "Z4464"}, {"notes": {"original_bigg_ids": ["Z2857"]}, "name": "sdaA", "id": "Z2857"}, {"notes": {"original_bigg_ids": ["Z1239"]}, "name": "serS", "id": "Z1239"}, {"notes": {"original_bigg_ids": ["Z4113"]}, "name": "sdaC", "id": "Z4113"}, {"notes": {"original_bigg_ids": ["Z4468"]}, "name": "tdcC", "id": "Z4468"}, {"notes": {"original_bigg_ids": ["Z4442"]}, "name": "ygjU", "id": "Z4442"}, {"notes": {"original_bigg_ids": ["Z3410"]}, "name": "yeiG", "id": "Z3410"}, {"notes": {"original_bigg_ids": ["Z0455"]}, "name": "yaiM", "id": "Z0455"}, {"notes": {"original_bigg_ids": ["Z2776"]}, "name": "ydjS", "id": "Z2776"}, {"notes": {"original_bigg_ids": ["Z2778"]}, "name": "None", "id": "Z2778"}, {"notes": {"original_bigg_ids": ["Z3523"]}, "name": "yfbB", "id": "Z3523"}, {"notes": {"original_bigg_ids": ["Z4729"]}, "name": "cysG", "id": "Z4729"}, {"notes": {"original_bigg_ids": ["Z4652"]}, "name": "aroE", "id": "Z4652"}, {"notes": {"original_bigg_ids": ["Z4743"]}, "name": "aroK", "id": "Z4743"}, {"notes": {"original_bigg_ids": ["Z0484"]}, "name": "aroL", "id": "Z0484"}, {"notes": {"original_bigg_ids": ["Z5494"]}, "name": "metB", "id": "Z5494"}, {"notes": {"original_bigg_ids": ["Z3138"]}, "name": "shiA", "id": "Z3138"}, {"notes": {"original_bigg_ids": ["Z1977"]}, "name": "ychM", "id": "Z1977"}, {"notes": {"original_bigg_ids": ["Z2571"]}, "name": "speG", "id": "Z2571"}, {"notes": {"original_bigg_ids": ["Z2593"]}, "name": "None", "id": "Z2593"}, {"notes": {"original_bigg_ids": ["Z2594"]}, "name": "None", "id": "Z2594"}, {"notes": {"original_bigg_ids": ["Z5453"]}, "name": "sodA", "id": "Z5453"}, {"notes": {"original_bigg_ids": ["Z2678"]}, "name": "sodB", "id": "Z2678"}, {"notes": {"original_bigg_ids": ["Z2661"]}, "name": "sodC", "id": "Z2661"}, {"notes": {"original_bigg_ids": ["Z2178"]}, "name": "yneI", "id": "Z2178"}, {"notes": {"original_bigg_ids": ["Z3959"]}, "name": "gabD", "id": "Z3959"}, {"notes": {"original_bigg_ids": ["Z3520"]}, "name": "menE", "id": "Z3520"}, {"notes": {"original_bigg_ids": ["Z3521"]}, "name": "menC", "id": "Z3521"}, {"notes": {"original_bigg_ids": ["Z0878"]}, "name": "sdhB", "id": "Z0878"}, {"notes": {"original_bigg_ids": ["Z0876"]}, "name": "sdhD", "id": "Z0876"}, {"notes": {"original_bigg_ids": ["Z0875"]}, "name": "sdhC", "id": "Z0875"}, {"notes": {"original_bigg_ids": ["Z0877"]}, "name": "sdhA", "id": "Z0877"}, {"notes": {"original_bigg_ids": ["Z0883"]}, "name": "sucD", "id": "Z0883"}, {"notes": {"original_bigg_ids": ["Z0882"]}, "name": "sucC", "id": "Z0882"}, {"notes": {"original_bigg_ids": ["Z2184"]}, "name": "uxaB", "id": "Z2184"}, {"notes": {"original_bigg_ids": ["Z3720"]}, "name": "talA", "id": "Z3720"}, {"notes": {"original_bigg_ids": ["Z0008"]}, "name": "talB", "id": "Z0008"}, {"notes": {"original_bigg_ids": ["Z4415"]}, "name": "ttdB", "id": "Z4415"}, {"notes": {"original_bigg_ids": ["Z4414"]}, "name": "ttdA", "id": "Z4414"}, {"notes": {"original_bigg_ids": ["Z4416"]}, "name": "ygjE", "id": "Z4416"}, {"notes": {"original_bigg_ids": ["Z0467"]}, "name": "tauD", "id": "Z0467"}, {"notes": {"original_bigg_ids": ["Z5301"]}, "name": "wecD", "id": "Z5301"}, {"notes": {"original_bigg_ids": ["Z5302"]}, "name": "wecE", "id": "Z5302"}, {"notes": {"original_bigg_ids": ["Z5299"]}, "name": "rffG", "id": "Z5299"}, {"notes": {"original_bigg_ids": ["Z1261"]}, "name": "ycaH", "id": "Z1261"}, {"notes": {"original_bigg_ids": ["Z3258"]}, "name": "gatZ", "id": "Z3258"}, {"notes": {"original_bigg_ids": ["Z4484"]}, "name": "agaZ", "id": "Z4484"}, {"notes": {"original_bigg_ids": ["Z4491"]}, "name": "agaY", "id": "Z4491"}, {"notes": {"original_bigg_ids": ["Z3259"]}, "name": "gatY", "id": "Z3259"}, {"notes": {"original_bigg_ids": ["Z0176"]}, "name": "dapD", "id": "Z0176"}, {"notes": {"original_bigg_ids": ["Z3739"]}, "name": "bcp", "id": "Z3739"}, {"notes": {"original_bigg_ids": ["Z0077"]}, "name": "tbpA", "id": "Z0077"}, {"notes": {"original_bigg_ids": ["Z0076"]}, "name": "yabK", "id": "Z0076"}, {"notes": {"original_bigg_ids": ["Z0075"]}, "name": "yabJ", "id": "Z0075"}, {"notes": {"original_bigg_ids": ["Z5043"]}, "name": "tdh", "id": "Z5043"}, {"notes": {"original_bigg_ids": ["Z4469"]}, "name": "tdcB", "id": "Z4469"}, {"notes": {"original_bigg_ids": ["Z5283"]}, "name": "ilvA", "id": "Z5283"}, {"notes": {"original_bigg_ids": ["Z2748"]}, "name": "thrS", "id": "Z2748"}, {"notes": {"original_bigg_ids": ["Z5344"]}, "name": "yigJ", "id": "Z5344"}, {"notes": {"original_bigg_ids": ["Z5564"]}, "name": "thiH", "id": "Z5564"}, {"notes": {"original_bigg_ids": ["Z5567"]}, "name": "thiF", "id": "Z5567"}, {"notes": {"original_bigg_ids": ["Z0526"]}, "name": "yajK", "id": "Z0526"}, {"notes": {"original_bigg_ids": ["Z5566"]}, "name": "thiS", "id": "Z5566"}, {"notes": {"original_bigg_ids": ["Z3721"]}, "name": "tktB", "id": "Z3721"}, {"notes": {"original_bigg_ids": ["Z1414"]}, "name": "torC", "id": "Z1414"}, {"notes": {"original_bigg_ids": ["Z1415"]}, "name": "torA", "id": "Z1415"}, {"notes": {"original_bigg_ids": ["Z4144"]}, "name": "thyA", "id": "Z4144"}, {"notes": {"original_bigg_ids": ["Z1745"]}, "name": "ycfN", "id": "Z1745"}, {"notes": {"original_bigg_ids": ["Z0519"]}, "name": "thiL", "id": "Z0519"}, {"notes": {"original_bigg_ids": ["Z5568"]}, "name": "thiE", "id": "Z5568"}, {"notes": {"original_bigg_ids": ["Z5464"]}, "name": "tpiA", "id": "Z5464"}, {"notes": {"original_bigg_ids": ["Z0757"]}, "name": "citG", "id": "Z0757"}, {"notes": {"original_bigg_ids": ["Z1232"]}, "name": "trxB", "id": "Z1232"}, {"notes": {"original_bigg_ids": ["Z5849"]}, "name": "treC", "id": "Z5849"}, {"notes": {"original_bigg_ids": ["Z2950"]}, "name": "otsB", "id": "Z2950"}, {"notes": {"original_bigg_ids": ["Z2949"]}, "name": "otsA", "id": "Z2949"}, {"notes": {"original_bigg_ids": ["Z4932"]}, "name": "treF", "id": "Z4932"}, {"notes": {"original_bigg_ids": ["Z1968"]}, "name": "treA", "id": "Z1968"}, {"notes": {"original_bigg_ids": ["Z5850"]}, "name": "treB", "id": "Z5850"}, {"notes": {"original_bigg_ids": ["Z2550"]}, "name": "trpB", "id": "Z2550"}, {"notes": {"original_bigg_ids": ["Z2551"]}, "name": "trpA", "id": "Z2551"}, {"notes": {"original_bigg_ids": ["Z4737"]}, "name": "trpS", "id": "Z4737"}, {"notes": {"original_bigg_ids": ["Z5204"]}, "name": "tnaB", "id": "Z5204"}, {"notes": {"original_bigg_ids": ["Z4477"]}, "name": "yhaE", "id": "Z4477"}, {"notes": {"original_bigg_ids": ["Z0663"]}, "name": "ybbQ", "id": "Z0663"}, {"notes": {"original_bigg_ids": ["Z5565"]}, "name": "thiG", "id": "Z5565"}, {"notes": {"original_bigg_ids": ["Z2650"]}, "name": "tyrS", "id": "Z2650"}, {"notes": {"original_bigg_ids": ["Z2963"]}, "name": "tyrP", "id": "Z2963"}, {"notes": {"original_bigg_ids": ["Z0191"]}, "name": "lpxD", "id": "Z0191"}, {"notes": {"original_bigg_ids": ["Z0095"]}, "name": "murE", "id": "Z0095"}, {"notes": {"original_bigg_ids": ["Z5298"]}, "name": "wecC", "id": "Z5298"}, {"notes": {"original_bigg_ids": ["Z5297"]}, "name": "wecB", "id": "Z5297"}, {"notes": {"original_bigg_ids": ["Z0193"]}, "name": "lpxA", "id": "Z0193"}, {"notes": {"original_bigg_ids": ["Z4552"]}, "name": "murA", "id": "Z4552"}, {"notes": {"original_bigg_ids": ["Z0100"]}, "name": "murG", "id": "Z0100"}, {"notes": {"original_bigg_ids": ["Z0098"]}, "name": "murD", "id": "Z0098"}, {"notes": {"original_bigg_ids": ["Z0101"]}, "name": "murC", "id": "Z0101"}, {"notes": {"original_bigg_ids": ["Z5543"]}, "name": "murB", "id": "Z5543"}, {"notes": {"original_bigg_ids": ["Z1068"]}, "name": "ybjG", "id": "Z1068"}, {"notes": {"original_bigg_ids": ["Z4410"]}, "name": "bacA", "id": "Z4410"}, {"notes": 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"pg181_p"}, {"name": "Spermidine", "notes": {"original_bigg_ids": ["spmd_c"]}, "charge": 3, "formula": "C7H22N3", "compartment": "c", "id": "spmd_c"}, {"name": "Putrescine", "notes": {"original_bigg_ids": ["ptrc_c"]}, "charge": 2, "formula": "C4H14N2", "compartment": "c", "id": "ptrc_c"}, {"name": "Phosphatidylethanolamine (dioctadec-11-enoyl, n-C18:1)", "notes": {"original_bigg_ids": ["pe181_p"]}, "charge": 0, "formula": "C41H78N1O8P1", "compartment": "p", "id": "pe181_p"}, {"name": "Phosphatidylethanolamine (dihexadec-9enoyl, n-C16:1)", "notes": {"original_bigg_ids": ["pe161_c"]}, "charge": 0, "formula": "C37H70N1O8P1", "compartment": "c", "id": "pe161_c"}, {"name": "Phosphate", "notes": {"original_bigg_ids": ["pi_c"]}, "charge": -2, "formula": "HO4P", "compartment": "c", "id": "pi_c"}, {"name": "Cardiolipin (tetraoctadec-11-enoyl, n-C18:1)", "notes": {"original_bigg_ids": ["clpn181_p"]}, "charge": -2, "formula": "C81H148O17P2", "compartment": "p", "id": "clpn181_p"}, {"name": 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"id": "murein4px4px4p_p"}, {"name": "ATP", "notes": {"original_bigg_ids": ["atp_c"]}, "charge": -4, "formula": "C10H12N5O13P3", "compartment": "c", "id": "atp_c"}, {"name": "Sulfate", "notes": {"original_bigg_ids": ["so4_c"]}, "charge": -2, "formula": "O4S", "compartment": "c", "id": "so4_c"}, {"name": "Siroheme", "notes": {"original_bigg_ids": ["sheme_c"]}, "charge": -8, "formula": "C42H36FeN4O16", "compartment": "c", "id": "sheme_c"}, {"name": "Adenosylcobalamin", "notes": {"original_bigg_ids": ["adocbl_c"]}, "charge": 0, "formula": "C72H100CoN18O17P", "compartment": "c", "id": "adocbl_c"}, {"name": "Core oligosaccharide lipid A", "notes": {"original_bigg_ids": ["colipa_e"]}, "charge": -11, "formula": "C176H303N2O100P4", "compartment": "e", "id": "colipa_e"}, {"name": "Phosphatidylethanolamine (dioctadec-11-enoyl, n-C18:1)", "notes": {"original_bigg_ids": ["pe181_c"]}, "charge": 0, "formula": "C41H78N1O8P1", "compartment": "c", "id": "pe181_c"}, {"name": "Phosphatidylglycerol (dioctadec-11-enoyl, n-C18:1)", "notes": {"original_bigg_ids": ["pg181_c"]}, "charge": -1, "formula": "C42H78O10P1", "compartment": "c", "id": "pg181_c"}, {"name": "CTP", "notes": {"original_bigg_ids": ["ctp_c"]}, "charge": -4, "formula": "C9H12N3O14P3", "compartment": "c", "id": "ctp_c"}, {"name": "Nicotinamide adenine dinucleotide phosphate", "notes": {"original_bigg_ids": ["nadp_c"]}, "charge": -3, "formula": "C21H25N7O17P3", "compartment": "c", "id": "nadp_c"}, {"name": "GTP", "notes": {"original_bigg_ids": ["gtp_c"]}, "charge": -4, "formula": "C10H12N5O14P3", "compartment": "c", "id": "gtp_c"}, {"name": "Two disacharide linked murein units, tetrapeptide corsslinked tetrapeptide (A2pm->D-ala) (middle of chain)", "notes": {"original_bigg_ids": ["murein4px4p_p"]}, "charge": -4, "formula": "C74H112N14O39", "compartment": "p", "id": "murein4px4p_p"}, {"name": "Nickel", "notes": {"original_bigg_ids": ["ni2_c"]}, "charge": 2, "formula": "Ni", "compartment": "c", "id": "ni2_c"}, {"name": "L-Histidine", "notes": {"original_bigg_ids": ["his_DASH_L_c"]}, "charge": 0, "formula": "C6H9N3O2", "compartment": "c", "id": "his__L_c"}, {"name": "L-Cysteine", "notes": {"original_bigg_ids": ["cys_DASH_L_c"]}, "charge": 0, "formula": "C3H7NO2S", "compartment": "c", "id": "cys__L_c"}, {"name": "10-Formyltetrahydrofolate", "notes": {"original_bigg_ids": ["10fthf_c"]}, "charge": -2, "formula": "C20H21N7O7", "compartment": "c", "id": "10fthf_c"}, {"name": "L-Arginine", "notes": {"original_bigg_ids": ["arg_DASH_L_c"]}, "charge": 1, "formula": "C6H15N4O2", "compartment": "c", "id": "arg__L_c"}, {"name": "Glycogen", "notes": {"original_bigg_ids": ["glycogen_c"]}, "charge": 0, "formula": "C6H10O5", "compartment": "c", "id": "glycogen_c"}, {"name": "[2Fe-2S] iron-sulfur cluster", "notes": {"original_bigg_ids": ["2fe2s_c"]}, "charge": 2, "formula": "S2Fe2", "compartment": "c", "id": "2fe2s_c"}, {"name": "2-Octaprenyl-6-hydroxyphenol", "notes": {"original_bigg_ids": ["2ohph_c"]}, "charge": 0, "formula": "C46H70O2", "compartment": "c", "id": "2ohph_c"}, {"name": "Two disacharide linked murein units, pentapeptide crosslinked tetrapeptide (A2pm->D-ala) (middle of chain)", "notes": {"original_bigg_ids": ["murein5px4p_p"]}, "charge": -4, "formula": "C77H117N15O40", "compartment": "p", "id": "murein5px4p_p"}, {"name": "KDO(2)-lipid IV(A)", "notes": {"original_bigg_ids": ["kdo2lipid4_e"]}, "charge": -6, "formula": "C84H148N2O37P2", "compartment": "e", "id": "kdo2lipid4_e"}, {"name": "(R)-Propane-1,2-diol", "notes": {"original_bigg_ids": ["12ppd_DASH_R_e"]}, "charge": 0, "formula": "C3H8O2", "compartment": "e", "id": "12ppd__R_e"}, {"name": "(S)-Propane-1,2-diol", "notes": {"original_bigg_ids": ["12ppd_DASH_S_e"]}, "charge": 0, "formula": "C3H8O2", "compartment": "e", "id": "12ppd__S_e"}, {"name": "1,4-alpha-D-glucan", "notes": {"original_bigg_ids": ["14glucan_e"]}, "charge": 0, "formula": "C36H62O31", "compartment": "e", "id": "14glucan_e"}, {"name": "1,5-Diaminopentane", "notes": 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"C7H14N2O4", "compartment": "e", "id": "26dap__M_e"}, {"name": "2-Dehydro-3-deoxy-D-gluconate", "notes": {"original_bigg_ids": ["2ddglcn_e"]}, "charge": -1, "formula": "C6H9O6", "compartment": "e", "id": "2ddglcn_e"}, {"name": "3,4-Dihydroxyphenylacetaldehyde", "notes": {"original_bigg_ids": ["34dhpac_e"]}, "charge": 0, "formula": "C8H8O3", "compartment": "e", "id": "34dhpac_e"}, {"name": "3'-AMP", "notes": {"original_bigg_ids": ["3amp_e"]}, "charge": -2, "formula": "C10H12N5O7P", "compartment": "e", "id": "3amp_e"}, {"name": "3'-cmp", "notes": {"original_bigg_ids": ["3cmp_e"]}, "charge": -2, "formula": "C9H12N3O8P", "compartment": "e", "id": "3cmp_e"}, {"name": "3'-GMP", "notes": {"original_bigg_ids": ["3gmp_e"]}, "charge": -2, "formula": "C10H12N5O8P", "compartment": "e", "id": "3gmp_e"}, {"name": "3-hydroxycinnamic acid", "notes": {"original_bigg_ids": ["3hcinnm_e"]}, "charge": -1, "formula": "C9H7O3", "compartment": "e", "id": "3hcinnm_e"}, {"name": "3-Hydroxypropanoate", "notes": {"original_bigg_ids": ["3hpp_e"]}, "charge": -1, "formula": "C3H5O3", "compartment": "e", "id": "3hpp_e"}, {"name": "3-(3-hydroxy-phenyl)propionate", "notes": {"original_bigg_ids": ["3hpppn_e"]}, "charge": -1, "formula": "C9H9O3", "compartment": "e", "id": "3hpppn_e"}, {"name": "3'-UMP", "notes": {"original_bigg_ids": ["3ump_e"]}, "charge": -2, "formula": "C9H11N2O9P", "compartment": "e", "id": "3ump_e"}, {"name": "4-Aminobutanoate", "notes": {"original_bigg_ids": ["4abut_e"]}, "charge": 0, "formula": "C4H9NO2", "compartment": "e", "id": "4abut_e"}, {"name": "4-Hydroxyphenylacetaldehyde", "notes": {"original_bigg_ids": ["4hoxpacd_e"]}, "charge": 0, "formula": "C8H8O2", "compartment": "e", "id": "4hoxpacd_e"}, {"name": "5-Dehydro-D-gluconate", "notes": {"original_bigg_ids": ["5dglcn_e"]}, "charge": -1, "formula": "C6H9O7", "compartment": "e", "id": "5dglcn_e"}, {"name": "5-Methylthio-D-ribose", "notes": {"original_bigg_ids": ["5mtr_e"]}, "charge": 0, "formula": "C6H12O4S", "compartment": "e", "id": "5mtr_e"}, {"name": "L-alanine-D-glutamate", "notes": {"original_bigg_ids": ["LalaDglu_e"]}, "charge": -1, "formula": "C8H13N2O5", "compartment": "e", "id": "LalaDglu_e"}, {"name": "L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate", "notes": {"original_bigg_ids": ["LalaDgluMdap_e"]}, "charge": -1, "formula": "C15H25N4O8", "compartment": "e", "id": "LalaDgluMdap_e"}, {"name": "L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate-D-alanine", "notes": {"original_bigg_ids": ["LalaDgluMdapDala_e"]}, "charge": -1, "formula": "C18H30N5O9", "compartment": "e", "id": "LalaDgluMdapDala_e"}, {"name": "L-alanine-L-glutamate", "notes": {"original_bigg_ids": ["LalaLglu_e"]}, "charge": -1, "formula": "C8H13N2O5", "compartment": "e", "id": "LalaLglu_e"}, {"name": "Acetate", "notes": {"original_bigg_ids": ["ac_e"]}, "charge": -1, "formula": "C2H3O2", "compartment": "e", "id": "ac_e"}, {"name": "Acetoacetate", "notes": {"original_bigg_ids": ["acac_e"]}, "charge": -1, "formula": "C4H5O3", "compartment": "e", "id": "acac_e"}, {"name": "Acetaldehyde", "notes": {"original_bigg_ids": ["acald_e"]}, "charge": 0, "formula": "C2H4O", "compartment": "e", "id": "acald_e"}, {"name": "N-Acetyl-D-galactosamine", "notes": {"original_bigg_ids": ["acgal_e"]}, "charge": 0, "formula": "C8H15NO6", "compartment": "e", "id": "acgal_e"}, {"name": "N-Acetyl-D-galactosamine 1-phosphate", "notes": {"original_bigg_ids": ["acgal1p_e"]}, "charge": -2, "formula": "C8H14NO9P", "compartment": "e", "id": "acgal1p_e"}, {"name": "N-Acetyl-D-glucosamine", "notes": {"original_bigg_ids": ["acgam_e"]}, "charge": 0, "formula": "C8H15NO6", "compartment": "e", "id": "acgam_e"}, {"name": "N-Acetyl-D-glucosamine 1-phosphate", "notes": {"original_bigg_ids": ["acgam1p_e"]}, "charge": -2, "formula": "C8H14NO9P", "compartment": "e", "id": "acgam1p_e"}, {"name": "N-Acetyl-D-mannosamine", "notes": {"original_bigg_ids": ["acmana_e"]}, "charge": 0, "formula": "C8H15NO6", "compartment": "e", "id": "acmana_e"}, {"name": "N-Acetylmuramate", "notes": {"original_bigg_ids": ["acmum_e"]}, "charge": -1, "formula": "C11H18NO8", "compartment": "e", "id": "acmum_e"}, {"name": "N-Acetylneuraminate", "notes": {"original_bigg_ids": ["acnam_e"]}, "charge": -1, "formula": "C11H18NO9", "compartment": "e", "id": "acnam_e"}, {"name": "4-Amino-4-deoxy-L-arabinose modified core oligosaccharide lipid A", "notes": {"original_bigg_ids": ["acolipa_e"]}, "charge": -9, "formula": "C181H314N3O103P4", "compartment": "e", "id": "acolipa_e"}, {"name": "O-Acetyl-L-serine", "notes": {"original_bigg_ids": ["acser_e"]}, "charge": 0, "formula": "C5H9NO4", "compartment": "e", "id": "acser_e"}, {"name": "Adenine", "notes": {"original_bigg_ids": ["ade_e"]}, "charge": 0, "formula": "C5H5N5", "compartment": "e", "id": "ade_e"}, {"name": "Adenosine", "notes": {"original_bigg_ids": ["adn_e"]}, "charge": 0, "formula": "C10H13N5O4", "compartment": "e", "id": "adn_e"}, {"name": "Adenosylcobalamin", "notes": 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"notes": {"original_bigg_ids": ["alaala_e"]}, "charge": 0, "formula": "C6H12N2O3", "compartment": "e", "id": "alaala_e"}, {"name": "D-Allose", "notes": {"original_bigg_ids": ["all_DASH_D_e"]}, "charge": 0, "formula": "C6H12O6", "compartment": "e", "id": "all__D_e"}, {"name": "Allantoin", "notes": {"original_bigg_ids": ["alltn_e"]}, "charge": 0, "formula": "C4H6N4O3", "compartment": "e", "id": "alltn_e"}, {"name": "AMP", "notes": {"original_bigg_ids": ["amp_e"]}, "charge": -2, "formula": "C10H12N5O7P", "compartment": "e", "id": "amp_e"}, {"name": "N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramic acid", "notes": {"original_bigg_ids": ["anhgm_e"]}, "charge": -1, "formula": "C19H29N2O12", "compartment": "e", "id": "anhgm_e"}, {"name": "L-Arabinose", "notes": {"original_bigg_ids": ["arab_DASH_L_e"]}, "charge": 0, "formula": "C5H10O5", "compartment": "e", "id": "arab__L_e"}, {"name": "Arbutin", "notes": {"original_bigg_ids": ["arbt_e"]}, "charge": 0, "formula": "C12H16O7", "compartment": 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"compartment": "e", "id": "meoh_e"}, {"name": "D-Methionine", "notes": {"original_bigg_ids": ["met_DASH_D_e"]}, "charge": 0, "formula": "C5H10NO2S", "compartment": "e", "id": "met__D_e"}, {"name": "L-Methionine", "notes": {"original_bigg_ids": ["met_DASH_L_e"]}, "charge": 0, "formula": "C5H11NO2S", "compartment": "e", "id": "met__L_e"}, {"name": "L-methionine-R-sulfoxide", "notes": {"original_bigg_ids": ["metsox_DASH_R_DASH_L_e"]}, "charge": 0, "formula": "C5H11NO3S", "compartment": "e", "id": "metsox_R__L_e"}, {"name": "L-Methionine Sulfoxide", "notes": {"original_bigg_ids": ["metsox_DASH_S_DASH_L_e"]}, "charge": 0, "formula": "C5H11NO3S", "compartment": "e", "id": "metsox_S__L_e"}, {"name": "Magnesium", "notes": {"original_bigg_ids": ["mg2_e"]}, "charge": 2, "formula": "Mg", "compartment": "e", "id": "mg2_e"}, {"name": "Minocycline", "notes": {"original_bigg_ids": ["mincyc_e"]}, "charge": 0, "formula": "C23H27N3O7", "compartment": "e", "id": "mincyc_e"}, {"name": "Myo-Inositol 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"compartment": "e", "id": "no3_e"}, {"name": "Novobiocin", "notes": {"original_bigg_ids": ["novbcn_e"]}, "charge": 0, "formula": "C31H36N2O11", "compartment": "e", "id": "novbcn_e"}, {"name": "(O16 antigen)x4 core oligosaccharide lipid A", "notes": {"original_bigg_ids": ["o16a4colipa_e"]}, "charge": -11, "formula": "C312H523N6O200P4", "compartment": "e", "id": "o16a4colipa_e"}, {"name": "O2", "notes": {"original_bigg_ids": ["o2_e"]}, "charge": 0, "formula": "O2", "compartment": "e", "id": "o2_e"}, {"name": "Superoxide anion", "notes": {"original_bigg_ids": ["o2s_e"]}, "charge": -1, "formula": "O2", "compartment": "e", "id": "o2s_e"}, {"name": "Octadecanoate (n-C18:0)", "notes": {"original_bigg_ids": ["ocdca_e"]}, "charge": -1, "formula": "C18H35O2", "compartment": "e", "id": "ocdca_e"}, {"name": "Octadecenoate (n-C18:1)", "notes": {"original_bigg_ids": ["ocdcea_e"]}, "charge": -1, "formula": "C18H33O2", "compartment": "e", "id": "ocdcea_e"}, {"name": "Octanoate (n-C8:0)", "notes": 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"id": "2agpg120_c"}, {"name": "2-Acyl-sn-glycero-3-phosphoglycerol (n-C12:0)", "notes": {"original_bigg_ids": ["2agpg120_p"]}, "charge": -1, "formula": "C18H36O9P1", "compartment": "p", "id": "2agpg120_p"}, {"name": "2-Acyl-sn-glycero-3-phosphoglycerol (n-C14:0)", "notes": {"original_bigg_ids": ["2agpg140_c"]}, "charge": -1, "formula": "C20H40O9P1", "compartment": "c", "id": "2agpg140_c"}, {"name": "2-Acyl-sn-glycero-3-phosphoglycerol (n-C14:0)", "notes": {"original_bigg_ids": ["2agpg140_p"]}, "charge": -1, "formula": "C20H40O9P1", "compartment": "p", "id": "2agpg140_p"}, {"name": "2-Acyl-sn-glycero-3-phosphoglycerol (n-C14:1)", "notes": {"original_bigg_ids": ["2agpg141_c"]}, "charge": -1, "formula": "C20H38O9P1", "compartment": "c", "id": "2agpg141_c"}, {"name": "2-Acyl-sn-glycero-3-phosphoglycerol (n-C14:1)", "notes": {"original_bigg_ids": ["2agpg141_p"]}, "charge": -1, "formula": "C20H38O9P1", "compartment": "p", "id": "2agpg141_p"}, {"name": "2-Acyl-sn-glycero-3-phosphoglycerol (n-C16:0)", "notes": {"original_bigg_ids": ["2agpg160_p"]}, "charge": -1, "formula": "C22H44O9P1", "compartment": "p", "id": "2agpg160_p"}, {"name": "2-Acyl-sn-glycero-3-phosphoglycerol (n-C16:0)", "notes": {"original_bigg_ids": ["2agpg160_c"]}, "charge": -1, "formula": "C22H44O9P1", "compartment": "c", "id": "2agpg160_c"}, {"name": "2-Acyl-sn-glycero-3-phosphoglycerol (n-C16:1)", "notes": {"original_bigg_ids": ["2agpg161_p"]}, "charge": -1, "formula": "C22H42O9P1", "compartment": "p", "id": "2agpg161_p"}, {"name": "2-Acyl-sn-glycero-3-phosphoglycerol (n-C16:1)", "notes": {"original_bigg_ids": ["2agpg161_c"]}, "charge": -1, "formula": "C22H42O9P1", "compartment": "c", "id": "2agpg161_c"}, {"name": "2-Acyl-sn-glycero-3-phosphoglycerol (n-C18:0)", "notes": {"original_bigg_ids": ["2agpg180_c"]}, "charge": -1, "formula": "C24H48O9P1", "compartment": "c", "id": "2agpg180_c"}, {"name": "2-Acyl-sn-glycero-3-phosphoglycerol (n-C18:0)", "notes": {"original_bigg_ids": ["2agpg180_p"]}, "charge": -1, "formula": "C24H48O9P1", "compartment": "p", "id": "2agpg180_p"}, {"name": "2-Acyl-sn-glycero-3-phosphoglycerol (n-C18:1)", "notes": {"original_bigg_ids": ["2agpg181_p"]}, "charge": -1, "formula": "C24H46O9P1", "compartment": "p", "id": "2agpg181_p"}, {"name": "2-Acyl-sn-glycero-3-phosphoglycerol (n-C18:1)", "notes": {"original_bigg_ids": ["2agpg181_c"]}, "charge": -1, "formula": "C24H46O9P1", "compartment": "c", "id": "2agpg181_c"}, {"name": "Phosphatidylglycerol (didodecanoyl, n-C12:0)", "notes": {"original_bigg_ids": ["pg120_c"]}, "charge": -1, "formula": "C30H58O10P1", "compartment": "c", "id": "pg120_c"}, {"name": "Phosphatidylglycerol (ditetradecanoyl, n-C14:0)", "notes": {"original_bigg_ids": ["pg140_c"]}, "charge": -1, "formula": "C34H66O10P1", "compartment": "c", "id": "pg140_c"}, {"name": "Phosphatidylglycerol (ditetradec-7-enoyl, n-C14:1)", "notes": {"original_bigg_ids": ["pg141_c"]}, "charge": -1, "formula": "C34H62O10P1", "compartment": "c", "id": "pg141_c"}, {"name": "Phosphatidylglycerol (dioctadecanoyl, n-C18:0)", "notes": {"original_bigg_ids": ["pg180_c"]}, "charge": -1, "formula": "C42H82O10P1", "compartment": "c", "id": "pg180_c"}, {"name": "2-Dehydro-L-gulonate", "notes": {"original_bigg_ids": ["2dhguln_c"]}, "charge": -1, "formula": "C6H9O7", "compartment": "c", "id": "2dhguln_c"}, {"name": "D-Gluconate", "notes": {"original_bigg_ids": ["glcn_c"]}, "charge": -1, "formula": "C6H11O7", "compartment": "c", "id": "glcn_c"}, {"name": "L-Idonate", "notes": {"original_bigg_ids": ["idon_DASH_L_c"]}, "charge": -1, "formula": "C6H11O7", "compartment": "c", "id": "idon__L_c"}, {"name": "4-Amino-2-methyl-5-phosphomethylpyrimidine", "notes": {"original_bigg_ids": ["4ampm_c"]}, "charge": -2, "formula": "C6H8N3O4P", "compartment": "c", "id": "4ampm_c"}, {"name": "2-Methyl-4-amino-5-hydroxymethylpyrimidine diphosphate", "notes": {"original_bigg_ids": ["2mahmp_c"]}, "charge": -3, "formula": "C6H8N3O7P2", "compartment": "c", "id": "2mahmp_c"}, {"name": "3,4-Dihydroxyphenylacetaldehyde", "notes": {"original_bigg_ids": ["34dhpac_p"]}, "charge": 0, "formula": "C8H8O3", "compartment": "p", "id": "34dhpac_p"}, {"name": "Malonate semialdehyde", "notes": {"original_bigg_ids": ["msa_c"]}, "charge": -1, "formula": "C3H3O3", "compartment": "c", "id": "msa_c"}, {"name": "3-Aminoacrylate", "notes": {"original_bigg_ids": ["3amac_c"]}, "charge": -1, "formula": "C3H4NO2", "compartment": "c", "id": "3amac_c"}, {"name": "(R)-3-Hydroxydecanoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["3hdecACP_c"]}, "charge": -1, "formula": "C21H39N2O9PRS", "compartment": "c", "id": "3hdecACP_c"}, {"name": "Trans-Dec-2-enoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["tdec2eACP_c"]}, "charge": -1, "formula": "C21H37N2O8PRS", "compartment": "c", "id": "tdec2eACP_c"}, {"name": "(R)-3-Hydroxydodecanoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["3hddecACP_c"]}, "charge": -1, "formula": "C23H43N2O9PRS", "compartment": "c", "id": "3hddecACP_c"}, {"name": "Trans-Dodec-2-enoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["tddec2eACP_c"]}, "charge": -1, "formula": "C23H41N2O8PRS", "compartment": "c", "id": "tddec2eACP_c"}, {"name": "(R)-3-hydroxy-cis-dodec-5-enoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["3hcddec5eACP_c"]}, "charge": -1, "formula": "C23H41N2O9PRS", "compartment": "c", "id": "3hcddec5eACP_c"}, {"name": "Trans-3-cis-5-dodecenoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["t3c5ddeceACP_c"]}, "charge": -1, "formula": "C23H39N2O8PRS", "compartment": "c", "id": "t3c5ddeceACP_c"}, {"name": "(R)-3-Hydroxytetradecanoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["3hmrsACP_c"]}, "charge": -1, "formula": "C25H47N2O9PRS", "compartment": "c", "id": "3hmrsACP_c"}, {"name": "Trans-Tetradec-2-enoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["tmrs2eACP_c"]}, "charge": -1, "formula": "C25H45N2O8PRS", "compartment": "c", "id": "tmrs2eACP_c"}, {"name": "(R)-3-hydroxy-cis-myristol-7-eoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["3hcmrs7eACP_c"]}, "charge": -1, "formula": "C25H45N2O9PRS", "compartment": "c", "id": "3hcmrs7eACP_c"}, {"name": "Trans-3-cis-7-myristoleoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["t3c7mrseACP_c"]}, "charge": -1, "formula": "C25H43N2O8PRS", "compartment": "c", "id": "t3c7mrseACP_c"}, {"name": "Trans-Hexadec-2-enoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["tpalm2eACP_c"]}, "charge": -1, "formula": "C27H49N2O8PRS", "compartment": "c", "id": "tpalm2eACP_c"}, {"name": "R-3-hydroxypalmitoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["3hpalmACP_c"]}, "charge": -1, "formula": "C27H51N2O9PRS", "compartment": "c", "id": "3hpalmACP_c"}, {"name": "Trans-3-cis-9-palmitoleoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["t3c9palmeACP_c"]}, "charge": -1, "formula": "C27H47N2O8PRS", "compartment": "c", "id": "t3c9palmeACP_c"}, {"name": "(R)-3-hydroxy-cis-palm-9-eoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["3hcpalm9eACP_c"]}, "charge": -1, "formula": "C27H49N2O9PRS", "compartment": "c", "id": "3hcpalm9eACP_c"}, {"name": "Trans-octadec-2-enoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["toctd2eACP_c"]}, "charge": -1, "formula": "C29H53N2O8PRS", "compartment": "c", "id": "toctd2eACP_c"}, {"name": "(R)-3-Hydroxyoctadecanoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["3hoctaACP_c"]}, "charge": -1, "formula": "C29H55N2O9PRS", "compartment": "c", "id": "3hoctaACP_c"}, {"name": "(R)-3-hydroxy-cis-vacc-11-enoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["3hcvac11eACP_c"]}, "charge": -1, "formula": "C29H53N2O9PRS", "compartment": "c", "id": "3hcvac11eACP_c"}, {"name": "Trans-3-cis-11-vacceoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["t3c11vaceACP_c"]}, "charge": -1, "formula": "C29H51N2O8PRS", "compartment": "c", "id": "t3c11vaceACP_c"}, {"name": "But-2-enoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["but2eACP_c"]}, "charge": -1, "formula": "C15H25N2O8PRS", "compartment": "c", "id": "but2eACP_c"}, {"name": "(3R)-3-Hydroxyacyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["3haACP_c"]}, "charge": -1, "formula": "C15H27N2O9PRS", "compartment": "c", "id": "3haACP_c"}, {"name": "Trans-Hex-2-enoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["thex2eACP_c"]}, "charge": -1, "formula": "C17H29N2O8PRS", "compartment": "c", "id": "thex2eACP_c"}, {"name": "(R)-3-Hydroxyhexanoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["3hhexACP_c"]}, "charge": -1, "formula": "C17H31N2O9PRS", "compartment": "c", "id": "3hhexACP_c"}, {"name": "Trans-Oct-2-enoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["toct2eACP_c"]}, "charge": -1, "formula": "C19H33N2O8PRS", "compartment": "c", "id": "toct2eACP_c"}, {"name": "(R)-3-Hydroxyoctanoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["3hoctACP_c"]}, "charge": -1, "formula": "C19H35N2O9PRS", "compartment": "c", "id": "3hoctACP_c"}, {"name": "O2", "notes": {"original_bigg_ids": ["o2_c"]}, "charge": 0, "formula": "O2", "compartment": "c", "id": "o2_c"}, {"name": "3-hydroxycinnamic acid", "notes": {"original_bigg_ids": ["3hcinnm_c"]}, "charge": -1, "formula": "C9H7O3", "compartment": "c", "id": "3hcinnm_c"}, {"name": "2,3-dihydroxicinnamic acid", "notes": {"original_bigg_ids": ["dhcinnm_c"]}, "charge": -1, "formula": "C9H7O4", "compartment": "c", "id": "dhcinnm_c"}, {"name": "3-(2,3-Dihydroxyphenyl)propanoate", "notes": {"original_bigg_ids": ["dhpppn_c"]}, "charge": -1, "formula": "C9H9O4", "compartment": "c", "id": "dhpppn_c"}, {"name": "3-(3-hydroxy-phenyl)propionate", "notes": {"original_bigg_ids": ["3hpppn_c"]}, "charge": -1, "formula": "C9H9O3", "compartment": "c", "id": "3hpppn_c"}, {"name": "3-Hydroxypropanoate", "notes": {"original_bigg_ids": ["3hpp_p"]}, "charge": -1, "formula": "C3H5O3", "compartment": "p", "id": "3hpp_p"}, {"name": "3-Hydroxypropanoate", "notes": {"original_bigg_ids": ["3hpp_c"]}, "charge": -1, "formula": "C3H5O3", "compartment": "c", "id": "3hpp_c"}, {"name": "Uridine", "notes": {"original_bigg_ids": ["uri_p"]}, "charge": 0, "formula": "C9H12N2O6", "compartment": "p", "id": "uri_p"}, {"name": "Phosphate", "notes": {"original_bigg_ids": ["pi_p"]}, "charge": -2, "formula": "HO4P", "compartment": "p", "id": "pi_p"}, {"name": "Cytidine", "notes": {"original_bigg_ids": ["cytd_p"]}, "charge": 0, "formula": "C9H13N3O5", "compartment": "p", "id": "cytd_p"}, {"name": "Adenosine", "notes": {"original_bigg_ids": ["adn_p"]}, "charge": 0, "formula": "C10H13N5O4", "compartment": "p", "id": "adn_p"}, {"name": "Guanosine", "notes": {"original_bigg_ids": ["gsn_p"]}, "charge": 0, "formula": "C10H13N5O5", "compartment": "p", "id": "gsn_p"}, {"name": "3-Oxodecanoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["3odecACP_c"]}, "charge": -1, "formula": "C21H37N2O9PRS", "compartment": "c", "id": "3odecACP_c"}, {"name": "3-Oxododecanoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["3oddecACP_c"]}, "charge": -1, "formula": "C23H41N2O9PRS", "compartment": "c", "id": "3oddecACP_c"}, {"name": "3-oxo-cis-dodec-5-enoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["3ocddec5eACP_c"]}, "charge": -1, "formula": "C23H39N2O9PRS", "compartment": "c", "id": "3ocddec5eACP_c"}, {"name": "3-Oxotetradecanoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["3omrsACP_c"]}, "charge": -1, "formula": "C25H45N2O9PRS", "compartment": "c", "id": "3omrsACP_c"}, {"name": "3-oxo-cis-myristol-7-eoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["3ocmrs7eACP_c"]}, "charge": -1, "formula": "C25H43N2O9PRS", "compartment": "c", "id": "3ocmrs7eACP_c"}, {"name": "3-Oxohexadecanoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["3opalmACP_c"]}, "charge": -1, "formula": "C27H49N2O9PRS", "compartment": "c", "id": "3opalmACP_c"}, {"name": "3-oxo-cis-palm-9-eoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["3ocpalm9eACP_c"]}, "charge": -1, "formula": "C27H47N2O9PRS", "compartment": "c", "id": "3ocpalm9eACP_c"}, {"name": "3-Oxooctadecanoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["3ooctdACP_c"]}, "charge": -1, "formula": "C29H53N2O9PRS", "compartment": "c", "id": "3ooctdACP_c"}, {"name": "3-oxo-cis-vacc-11-enoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["3ocvac11eACP_c"]}, "charge": -1, "formula": "C29H51N2O9PRS", "compartment": "c", "id": "3ocvac11eACP_c"}, {"name": "Acetoacetyl-ACP", "notes": {"original_bigg_ids": ["actACP_c"]}, "charge": -1, "formula": "C15H25N2O9PRS", "compartment": "c", "id": "actACP_c"}, {"name": "3-Oxohexanoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["3ohexACP_c"]}, "charge": -1, "formula": "C17H29N2O9PRS", "compartment": "c", "id": "3ohexACP_c"}, {"name": "3-Oxooctanoyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["3ooctACP_c"]}, "charge": -1, "formula": "C19H33N2O9PRS", "compartment": "c", "id": "3ooctACP_c"}, {"name": "Malonyl-[acyl-carrier protein]", "notes": {"original_bigg_ids": ["malACP_c"]}, "charge": -2, "formula": "C14H22N2O10PRS", "compartment": "c", "id": "malACP_c"}, {"name": "Octanoyl-ACP (n-C8:0ACP)", "notes": {"original_bigg_ids": ["ocACP_c"]}, "charge": -1, "formula": "C19H35N2O8PRS", "compartment": "c", "id": "ocACP_c"}, {"name": "Acyl carrier protein", "notes": {"original_bigg_ids": ["ACP_c"]}, "charge": -1, "formula": "C11H21N2O7PRS", "compartment": "c", "id": "ACP_c"}, {"name": "CO2", "notes": {"original_bigg_ids": ["co2_c"]}, "charge": 0, "formula": "CO2", "compartment": "c", "id": "co2_c"}, {"name": "Decanoyl-ACP (n-C10:0ACP)", "notes": {"original_bigg_ids": ["dcaACP_c"]}, "charge": -1, "formula": "C21H39N2O8PRS", "compartment": "c", "id": "dcaACP_c"}, {"name": "Cis-dec-3-enoyl-[acyl-carrier protein] (n-C10:1)", "notes": {"original_bigg_ids": ["cdec3eACP_c"]}, "charge": -1, "formula": "C21H37N2O8PRS", "compartment": "c", "id": "cdec3eACP_c"}, {"name": "Dodecanoyl-ACP (n-C12:0ACP)", "notes": {"original_bigg_ids": ["ddcaACP_c"]}, "charge": -1, "formula": "C23H43N2O8PRS", "compartment": "c", "id": "ddcaACP_c"}, {"name": "Cis-dodec-5-enoyl-[acyl-carrier protein] (n-C12:1)", "notes": {"original_bigg_ids": ["cddec5eACP_c"]}, "charge": -1, "formula": "C23H41N2O8PRS", "compartment": "c", "id": "cddec5eACP_c"}, {"name": "Myristoyl-ACP (n-C14:0ACP)", "notes": {"original_bigg_ids": ["myrsACP_c"]}, "charge": -1, "formula": "C25H47N2O8PRS", "compartment": "c", "id": "myrsACP_c"}, {"name": "Cis-tetradec-7-enoyl-[acyl-carrier protein] (n-C14:1)", "notes": {"original_bigg_ids": ["tdeACP_c"]}, "charge": -1, "formula": "C25H45N2O8PRS", "compartment": "c", "id": "tdeACP_c"}, {"name": "Palmitoyl-ACP (n-C16:0ACP)", "notes": {"original_bigg_ids": ["palmACP_c"]}, "charge": -1, "formula": "C27H51N2O8PRS", "compartment": "c", "id": "palmACP_c"}, {"name": "Cis-hexadec-9-enoyl-[acyl-carrier protein] (n-C16:1)", "notes": {"original_bigg_ids": ["hdeACP_c"]}, "charge": -1, "formula": "C27H49N2O8PRS", "compartment": "c", "id": "hdeACP_c"}, {"name": "Butyryl-ACP (n-C4:0ACP)", "notes": {"original_bigg_ids": ["butACP_c"]}, "charge": -1, "formula": "C15H27N2O8PRS", "compartment": "c", "id": "butACP_c"}, {"name": "Hexanoyl-ACP (n-C6:0ACP)", "notes": {"original_bigg_ids": ["hexACP_c"]}, "charge": -1, "formula": "C17H31N2O8PRS", "compartment": "c", "id": "hexACP_c"}, {"name": "L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate", "notes": {"original_bigg_ids": ["LalaDgluMdap_c"]}, "charge": -1, "formula": "C15H25N4O8", "compartment": "c", "id": "LalaDgluMdap_c"}, {"name": "L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate", "notes": {"original_bigg_ids": ["LalaDgluMdap_p"]}, "charge": -1, "formula": "C15H25N4O8", "compartment": "p", "id": "LalaDgluMdap_p"}, {"name": "4-Hydroxyphenylacetaldehyde", "notes": {"original_bigg_ids": ["4hoxpacd_p"]}, 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{"name": "Acyl phosphatidylglycerol (n-C16:1)", "notes": {"original_bigg_ids": ["apg161_c"]}, "charge": -1, "formula": "C54H98O11P", "compartment": "c", "id": "apg161_c"}, {"name": "Acyl phosphatidylglycerol (n-C18:0)", "notes": {"original_bigg_ids": ["apg180_c"]}, "charge": -1, "formula": "C60H116O11P", "compartment": "c", "id": "apg180_c"}, {"name": "Acyl phosphatidylglycerol (n-C18:1)", "notes": {"original_bigg_ids": ["apg181_c"]}, "charge": -1, "formula": "C60H110O11P", "compartment": "c", "id": "apg181_c"}, {"name": "L-Lysine-tRNA (Lys)", "notes": {"original_bigg_ids": ["lystrna_c"]}, "charge": 2, "formula": "C6H14N2OR", "compartment": "c", "id": "lystrna_c"}, {"name": "TRNA(Lys)", "notes": {"original_bigg_ids": ["trnalys_c"]}, "charge": 0, "formula": "R", "compartment": "c", "id": "trnalys_c"}, {"name": "L-Xylulose", "notes": {"original_bigg_ids": ["xylu_DASH_L_c"]}, "charge": 0, "formula": "C5H10O5", "compartment": "c", "id": "xylu__L_c"}, {"name": "L-Lyxose", "notes": 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"c", "id": "acmalt_c"}, {"name": "Maltopentaose", "notes": {"original_bigg_ids": ["maltpt_p"]}, "charge": 0, "formula": "C30H52O26", "compartment": "p", "id": "maltpt_p"}, {"name": "Maltotriose", "notes": {"original_bigg_ids": ["malttr_p"]}, "charge": 0, "formula": "C18H32O16", "compartment": "p", "id": "malttr_p"}, {"name": "Maltotetraose", "notes": {"original_bigg_ids": ["maltttr_p"]}, "charge": 0, "formula": "C24H42O21", "compartment": "p", "id": "maltttr_p"}, {"name": "Maltose", "notes": {"original_bigg_ids": ["malt_p"]}, "charge": 0, "formula": "C12H22O11", "compartment": "p", "id": "malt_p"}, {"name": "Maltose 6'-phosphate", "notes": {"original_bigg_ids": ["malt6p_c"]}, "charge": -2, "formula": "C12H21O14P", "compartment": "c", "id": "malt6p_c"}, {"name": "L-Malate", "notes": {"original_bigg_ids": ["mal_DASH_L_p"]}, "charge": -2, "formula": "C4H4O5", "compartment": "p", "id": "mal__L_p"}, {"name": "D-Mannose 6-phosphate", "notes": {"original_bigg_ids": ["man6p_p"]}, "charge": -2, 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"C76H137N2O30P2", "compartment": "c", "id": "kdolipid4_c"}, {"name": "2,3,2'3'-Tetrakis(beta-hydroxymyristoyl)-D-glucosaminyl-1,6-beta-D-glucosamine 1,4'-bisphosphate", "notes": {"original_bigg_ids": ["lipidA_c"]}, "charge": -4, "formula": "C68H126N2O23P2", "compartment": "c", "id": "lipidA_c"}, {"name": "Molybdate", "notes": {"original_bigg_ids": ["mobd_p"]}, "charge": -2, "formula": "MoO4", "compartment": "p", "id": "mobd_p"}, {"name": "Molybdopterin", "notes": {"original_bigg_ids": ["mpt_c"]}, "charge": -2, "formula": "C10H10N5O6PS2Cu", "compartment": "c", "id": "mpt_c"}, {"name": "Undecaprenyl-diphospho-N-acetylmuramoyl-(N-acetylglucosamine)-L-ala-D-glu-meso-2,6-diaminopimeloyl-D-ala-D-ala", "notes": {"original_bigg_ids": ["uaagmda_c"]}, "charge": -4, "formula": "C95H152N8O28P2", "compartment": "c", "id": "uaagmda_c"}, {"name": "MoaD Protein with carboxylate", "notes": {"original_bigg_ids": ["moadcoo_c"]}, "charge": -1, "formula": "C1O2X", "compartment": "c", "id": "moadcoo_c"}, {"name": "Methanesulfonate", "notes": {"original_bigg_ids": ["mso3_p"]}, "charge": -1, "formula": "CH3O3S", "compartment": "p", "id": "mso3_p"}, {"name": "N-Methyltryptophan", "notes": {"original_bigg_ids": ["Nmtrp_c"]}, "charge": 0, "formula": "C12H14N2O2", "compartment": "c", "id": "Nmtrp_c"}, {"name": "Nitrous oxide", "notes": {"original_bigg_ids": ["n2o_p"]}, "charge": 0, "formula": "N2O", "compartment": "p", "id": "n2o_p"}, {"name": "Nicotinate", "notes": {"original_bigg_ids": ["nac_p"]}, "charge": -1, "formula": "C6H4NO2", "compartment": "p", "id": "nac_p"}, {"name": "Nicotinate", "notes": {"original_bigg_ids": ["nac_c"]}, "charge": -1, "formula": "C6H4NO2", "compartment": "c", "id": "nac_c"}, {"name": "NMN", "notes": {"original_bigg_ids": ["nmn_c"]}, "charge": -1, "formula": "C11H14N2O8P", "compartment": "c", "id": "nmn_c"}, {"name": "Nicotinamide", "notes": {"original_bigg_ids": ["ncam_c"]}, "charge": 0, "formula": "C6H6N2O", "compartment": "c", "id": "ncam_c"}, {"name": "Deamino-NAD+", "notes": {"original_bigg_ids": ["dnad_c"]}, "charge": -2, "formula": "C21H24N6O15P2", "compartment": "c", "id": "dnad_c"}, {"name": "Nicotinate D-ribonucleotide", "notes": {"original_bigg_ids": ["nicrnt_c"]}, "charge": -2, "formula": "C11H12NO9P", "compartment": "c", "id": "nicrnt_c"}, {"name": "DUDP", "notes": {"original_bigg_ids": ["dudp_c"]}, "charge": -3, "formula": "C9H11N2O11P2", "compartment": "c", "id": "dudp_c"}, {"name": "Nickel", "notes": {"original_bigg_ids": ["ni2_p"]}, "charge": 2, "formula": "Ni", "compartment": "p", "id": "ni2_p"}, {"name": "NMN", "notes": {"original_bigg_ids": ["nmn_p"]}, "charge": -1, "formula": "C11H14N2O8P", "compartment": "p", "id": "nmn_p"}, {"name": "N1-(5-Phospho-alpha-D-ribosyl)-5,6-dimethylbenzimidazole", "notes": {"original_bigg_ids": ["5prdmbz_c"]}, "charge": -2, "formula": "C14H17N2O7P", "compartment": "c", "id": "5prdmbz_c"}, {"name": "5,6-Dimethylbenzimidazole", "notes": {"original_bigg_ids": ["dmbzid_c"]}, "charge": 0, "formula": "C9H10N2", "compartment": "c", "id": "dmbzid_c"}, {"name": "Quinolinate", "notes": {"original_bigg_ids": ["quln_c"]}, "charge": -2, "formula": "C7H3NO4", "compartment": "c", "id": "quln_c"}, {"name": "Nitrite", "notes": {"original_bigg_ids": ["no2_c"]}, "charge": -1, "formula": "NO2", "compartment": "c", "id": "no2_c"}, {"name": "Nitrite", "notes": {"original_bigg_ids": ["no2_p"]}, "charge": -1, "formula": "NO2", "compartment": "p", "id": "no2_p"}, {"name": "Nitrate", "notes": {"original_bigg_ids": ["no3_p"]}, "charge": -1, "formula": "NO3", "compartment": "p", "id": "no3_p"}, {"name": "Nitrate", "notes": {"original_bigg_ids": ["no3_c"]}, "charge": -1, "formula": "NO3", "compartment": "c", "id": "no3_c"}, {"name": "Novobiocin", "notes": {"original_bigg_ids": ["novbcn_p"]}, "charge": 0, "formula": "C31H36N2O11", "compartment": "p", "id": "novbcn_p"}, {"name": "Nitric oxide", "notes": {"original_bigg_ids": ["no_p"]}, "charge": 0, "formula": "NO", "compartment": "p", "id": "no_p"}, {"name": "Xanthosine", "notes": {"original_bigg_ids": ["xtsn_c"]}, "charge": 0, "formula": "C10H12N4O6", "compartment": "c", "id": "xtsn_c"}, {"name": "Xanthosine 5'-phosphate", "notes": {"original_bigg_ids": ["xmp_p"]}, "charge": -2, "formula": "C10H11N4O9P", "compartment": "p", "id": "xmp_p"}, {"name": "Xanthosine", "notes": {"original_bigg_ids": ["xtsn_p"]}, "charge": 0, "formula": "C10H12N4O6", "compartment": "p", "id": "xtsn_p"}, {"name": "DIMP", "notes": {"original_bigg_ids": ["dimp_c"]}, "charge": -2, "formula": "C10H11N4O7P", "compartment": "c", "id": "dimp_c"}, {"name": "UMP", "notes": {"original_bigg_ids": ["ump_p"]}, "charge": -2, "formula": "C9H11N2O9P", "compartment": "p", "id": "ump_p"}, {"name": "Thymidine", "notes": {"original_bigg_ids": ["thymd_c"]}, "charge": 0, "formula": "C10H14N2O5", "compartment": "c", "id": "thymd_c"}, {"name": "Thymidine", "notes": {"original_bigg_ids": ["thymd_p"]}, "charge": 0, "formula": "C10H14N2O5", "compartment": "p", "id": "thymd_p"}, {"name": "DIDP", "notes": {"original_bigg_ids": ["didp_c"]}, "charge": -3, "formula": "C10H11N4O10P2", "compartment": "c", "id": "didp_c"}, {"name": "XDP", "notes": {"original_bigg_ids": ["xdp_c"]}, "charge": -3, "formula": "C10H11N4O12P2", "compartment": "c", "id": "xdp_c"}, {"name": "(O16 antigen)x4 core oligosaccharide lipid A", "notes": {"original_bigg_ids": ["o16a4colipa_p"]}, "charge": -11, "formula": "C312H523N6O200P4", "compartment": "p", "id": "o16a4colipa_p"}, {"name": "Rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate", "notes": {"original_bigg_ids": ["ragund_c"]}, "charge": -2, "formula": "C69H113N1O16P2", "compartment": "c", "id": "ragund_c"}, {"name": "O-acetyl-rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate", "notes": {"original_bigg_ids": ["aragund_c"]}, "charge": -2, "formula": "C71H115N1O17P2", "compartment": "c", "id": "aragund_c"}, {"name": "Galactofuranosyl-glucosyl-O-acetyl-rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate", "notes": {"original_bigg_ids": ["gfgaragund_c"]}, "charge": -2, "formula": "C83H135N1O27P2", "compartment": "c", "id": "gfgaragund_c"}, {"name": "O16 antigen undecaprenyl diphosphate", "notes": {"original_bigg_ids": ["o16aund_c"]}, "charge": -2, "formula": "C89H145N1O32P2", "compartment": "c", "id": "o16aund_c"}, {"name": "Superoxide anion", "notes": {"original_bigg_ids": ["o2s_p"]}, "charge": -1, "formula": "O2", "compartment": "p", "id": "o2s_p"}, {"name": "3-Hydroxyglutaryl-[acyl-carrier protein] methyl ester", "notes": {"original_bigg_ids": ["hgmeACP_c"]}, "charge": -1, "formula": "C17H29N2O11PRS", "compartment": "c", "id": "hgmeACP_c"}, {"name": "3-Oxo-glutaryl-[acyl-carrier protein] methyl ester", "notes": {"original_bigg_ids": ["ogmeACP_c"]}, "charge": -1, "formula": "C17H27N2O11PRS", "compartment": "c", "id": "ogmeACP_c"}, {"name": "2-Oxo-3-hydroxy-4-phosphobutanoate", "notes": {"original_bigg_ids": ["ohpb_c"]}, "charge": -3, "formula": "C4H4O8P", "compartment": "c", "id": "ohpb_c"}, {"name": "2-Octaprenyl-6-methoxyphenol", "notes": {"original_bigg_ids": ["2omph_c"]}, "charge": 0, "formula": "C47H72O2", "compartment": "c", "id": "2omph_c"}, {"name": "2-Octaprenyl-3-methyl-6-methoxy- 1,4-benzoquinol", "notes": {"original_bigg_ids": ["2ommbl_c"]}, "charge": 0, "formula": "C48H74O3", "compartment": "c", "id": "2ommbl_c"}, {"name": "2-Octaprenyl-6-methoxy-1,4-benzoquinol", "notes": {"original_bigg_ids": ["2ombzl_c"]}, "charge": 0, "formula": "C47H72O3", "compartment": "c", "id": "2ombzl_c"}, {"name": "Orotidine 5'-phosphate", "notes": {"original_bigg_ids": ["orot5p_c"]}, "charge": -3, "formula": "C10H10N2O11P", "compartment": "c", "id": "orot5p_c"}, {"name": "2-Octaprenylphenol", "notes": {"original_bigg_ids": ["2oph_c"]}, "charge": 0, "formula": "C46H70O", "compartment": "c", "id": "2oph_c"}, {"name": "3-Hydroxypimeloyl-[acyl-carrier protein] methyl ester", "notes": {"original_bigg_ids": ["hpmeACP_c"]}, "charge": -1, "formula": "C19H33N2O11PRS", "compartment": "c", "id": "hpmeACP_c"}, {"name": "3-Oxo-pimeloyl-[acyl-carrier protein] methyl ester", "notes": {"original_bigg_ids": ["opmeACP_c"]}, "charge": -1, "formula": "C19H31N2O11PRS", "compartment": "c", "id": "opmeACP_c"}, {"name": "Orotate", "notes": {"original_bigg_ids": ["orot_p"]}, "charge": -1, "formula": "C5H3N2O4", "compartment": "p", "id": "orot_p"}, {"name": "Oxalureate", "notes": {"original_bigg_ids": ["oxur_c"]}, "charge": -1, "formula": "C3H3N2O4", "compartment": "c", "id": "oxur_c"}, {"name": "Phenylacetaldehyde", "notes": {"original_bigg_ids": ["pacald_c"]}, "charge": 0, "formula": "C8H8O", "compartment": "c", "id": "pacald_c"}, {"name": "Phenylacetaldehyde", "notes": {"original_bigg_ids": ["pacald_p"]}, "charge": 0, "formula": "C8H8O", "compartment": "p", "id": "pacald_p"}, {"name": "(R)-Pantothenate", "notes": {"original_bigg_ids": ["pnto_DASH_R_c"]}, "charge": -1, "formula": "C9H16NO5", "compartment": "c", "id": "pnto__R_c"}, {"name": "Undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine", "notes": {"original_bigg_ids": ["uagmda_c"]}, "charge": -4, "formula": "C87H139N7O23P2", "compartment": "c", "id": "uagmda_c"}, {"name": "UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine", "notes": {"original_bigg_ids": ["ugmda_c"]}, "charge": -4, "formula": "C41H61N9O28P2", "compartment": "c", "id": "ugmda_c"}, {"name": "Pyridoxine 5'-phosphate", "notes": {"original_bigg_ids": ["pdx5p_c"]}, "charge": -2, "formula": "C8H10NO6P", "compartment": "c", "id": "pdx5p_c"}, {"name": "Pyridoxine", "notes": {"original_bigg_ids": ["pydxn_c"]}, "charge": 0, "formula": "C8H11NO3", "compartment": "c", "id": "pydxn_c"}, {"name": "Phosphatidylethanolamine (didodecanoyl, n-C12:0)", "notes": {"original_bigg_ids": ["pe120_p"]}, "charge": 0, "formula": "C29H58N1O8P1", "compartment": "p", "id": "pe120_p"}, {"name": "Phosphatidylethanolamine (ditetradecanoyl, n-C14:0)", "notes": {"original_bigg_ids": ["pe140_p"]}, "charge": 0, "formula": "C33H66N1O8P1", "compartment": "p", "id": "pe140_p"}, {"name": "Phosphatidylethanolamine (ditetradec-7-enoyl, n-C14:1)", "notes": {"original_bigg_ids": ["pe141_p"]}, "charge": 0, "formula": "C33H62N1O8P1", "compartment": "p", "id": "pe141_p"}, {"name": "Phosphatidylethanolamine (dioctadecanoyl, n-C18:0)", "notes": {"original_bigg_ids": ["pe180_p"]}, "charge": 0, "formula": "C41H82N1O8P1", "compartment": "p", "id": "pe180_p"}, {"name": "Phenethylamine", "notes": {"original_bigg_ids": ["peamn_p"]}, "charge": 1, "formula": "C8H12N", "compartment": "p", "id": "peamn_p"}, {"name": "D-Tagatose 1,6-biphosphate", "notes": {"original_bigg_ids": ["tagdp_DASH_D_c"]}, "charge": -4, "formula": "C6H10O12P2", "compartment": "c", "id": "tagdp__D_c"}, {"name": "Sedoheptulose 7-phosphate", "notes": {"original_bigg_ids": ["s7p_c"]}, "charge": -2, "formula": "C7H13O10P", "compartment": "c", "id": "s7p_c"}, {"name": "3-Phosphohydroxypyruvate", "notes": {"original_bigg_ids": ["3php_c"]}, "charge": -3, "formula": "C3H2O7P", "compartment": "c", "id": "3php_c"}, {"name": "2-Phosphoglycolate", "notes": {"original_bigg_ids": ["2pglyc_c"]}, "charge": -3, "formula": "C2H2O6P", "compartment": "c", "id": "2pglyc_c"}, {"name": "Phosphatidylglycerophosphate (didodecanoyl, n-C12:0)", "notes": {"original_bigg_ids": ["pgp120_c"]}, "charge": -3, "formula": "C30H57O13P2", "compartment": "c", "id": "pgp120_c"}, {"name": "Phosphatidylglycerophosphate (didodecanoyl, n-C12:0)", "notes": {"original_bigg_ids": ["pgp120_p"]}, "charge": -3, "formula": "C30H57O13P2", "compartment": "p", "id": "pgp120_p"}, {"name": "Phosphatidylglycerophosphate (ditetradecanoyl, n-C14:0)", "notes": {"original_bigg_ids": ["pgp140_c"]}, "charge": -3, "formula": "C34H65O13P2", "compartment": "c", "id": "pgp140_c"}, {"name": "Phosphatidylglycerophosphate (ditetradecanoyl, n-C14:0)", "notes": {"original_bigg_ids": ["pgp140_p"]}, "charge": -3, "formula": "C34H65O13P2", "compartment": "p", "id": "pgp140_p"}, {"name": "Phosphatidylglycerophosphate (ditetradec-7-enoyl, n-C14:1)", "notes": {"original_bigg_ids": ["pgp141_c"]}, "charge": -3, "formula": "C34H61O13P2", "compartment": "c", "id": "pgp141_c"}, {"name": "Phosphatidylglycerophosphate (ditetradec-7-enoyl, n-C14:1)", "notes": {"original_bigg_ids": ["pgp141_p"]}, "charge": -3, "formula": "C34H61O13P2", "compartment": "p", "id": "pgp141_p"}, {"name": "Phosphatidylglycerophosphate (dihexadecanoyl, n-C16:0)", "notes": {"original_bigg_ids": ["pgp160_c"]}, "charge": -3, "formula": "C38H73O13P2", "compartment": "c", "id": "pgp160_c"}, {"name": "Phosphatidylglycerophosphate (dihexadecanoyl, n-C16:0)", "notes": {"original_bigg_ids": ["pgp160_p"]}, "charge": -3, "formula": "C38H73O13P2", "compartment": "p", "id": "pgp160_p"}, {"name": "Phosphatidylglycerophosphate (dihexadec-9-enoyl, n-C16:1)", "notes": {"original_bigg_ids": ["pgp161_p"]}, "charge": -3, "formula": "C38H69O13P2", "compartment": "p", "id": "pgp161_p"}, {"name": "Phosphatidylglycerophosphate (dihexadec-9-enoyl, n-C16:1)", "notes": {"original_bigg_ids": ["pgp161_c"]}, "charge": -3, "formula": "C38H69O13P2", "compartment": "c", "id": "pgp161_c"}, {"name": "Phosphatidylglycerophosphate (dioctadecanoyl, n-C18:0)", "notes": {"original_bigg_ids": ["pgp180_p"]}, "charge": -3, "formula": "C42H81O13P2", "compartment": "p", "id": "pgp180_p"}, {"name": "Phosphatidylglycerophosphate (dioctadecanoyl, n-C18:0)", "notes": {"original_bigg_ids": ["pgp180_c"]}, "charge": -3, "formula": "C42H81O13P2", "compartment": "c", "id": "pgp180_c"}, {"name": "Phosphatidylglycerophosphate (dioctadec-11-enoyl, n-C18:1)", "notes": {"original_bigg_ids": ["pgp181_c"]}, "charge": -3, "formula": "C42H77O13P2", "compartment": "c", "id": "pgp181_c"}, {"name": "Phosphatidylglycerophosphate (dioctadec-11-enoyl, n-C18:1)", "notes": {"original_bigg_ids": ["pgp181_p"]}, "charge": -3, "formula": "C42H77O13P2", "compartment": "p", "id": "pgp181_p"}, {"name": "Protoheme", "notes": {"original_bigg_ids": ["pheme_p"]}, "charge": -2, "formula": "C34H30FeN4O4", "compartment": "p", "id": "pheme_p"}, {"name": "Phenylpyruvate", "notes": {"original_bigg_ids": ["phpyr_c"]}, "charge": -1, "formula": "C9H7O3", "compartment": "c", "id": "phpyr_c"}, {"name": "L-Phenylalanyl-tRNA(Phe)", "notes": {"original_bigg_ids": ["phetrna_c"]}, "charge": 1, "formula": "C9H10NOR", "compartment": "c", "id": "phetrna_c"}, {"name": "TRNA(Phe)", "notes": {"original_bigg_ids": ["trnaphe_c"]}, "charge": 0, "formula": "R", "compartment": "c", "id": "trnaphe_c"}, {"name": "L-Phenylalanine", "notes": {"original_bigg_ids": ["phe_DASH_L_p"]}, "charge": 0, "formula": "C9H11NO2", "compartment": "p", "id": "phe__L_p"}, {"name": "4-(1-D-Ribitylamino)-5-aminouracil", "notes": {"original_bigg_ids": ["4r5au_c"]}, "charge": 0, "formula": "C9H16N4O6", "compartment": "c", "id": "4r5au_c"}, {"name": "D-4'-Phosphopantothenate", "notes": {"original_bigg_ids": ["4ppan_c"]}, "charge": -3, "formula": "C9H15NO8P", "compartment": "c", "id": "4ppan_c"}, {"name": "(R)-Pantothenate", "notes": {"original_bigg_ids": ["pnto_DASH_R_p"]}, "charge": -1, "formula": "C9H16NO5", "compartment": "p", "id": "pnto__R_p"}, {"name": "Peroxyaminoacrylate", "notes": {"original_bigg_ids": ["poaac_c"]}, "charge": 0, "formula": "C3H5NO3", "compartment": "c", "id": "poaac_c"}, {"name": "Propanoyl phosphate", "notes": {"original_bigg_ids": ["ppap_c"]}, "charge": -2, "formula": "C3H5O5P", "compartment": "c", "id": "ppap_c"}, {"name": "Propanal", "notes": {"original_bigg_ids": ["ppal_p"]}, "charge": 0, "formula": "C3H6O", "compartment": "p", "id": "ppal_p"}, {"name": "Propionate (n-C3:0)", "notes": {"original_bigg_ids": ["ppa_p"]}, "charge": -1, "formula": "C3H5O2", "compartment": "p", "id": "ppa_p"}, {"name": "N-((R)-4-Phosphopantothenoyl)-L-cysteine", "notes": {"original_bigg_ids": ["4ppcys_c"]}, "charge": -3, "formula": "C12H20N2O9PS", "compartment": "c", "id": "4ppcys_c"}, {"name": "Pantetheine 4'-phosphate", "notes": {"original_bigg_ids": ["pan4p_c"]}, "charge": -2, "formula": "C11H21N2O7PS", "compartment": "c", "id": "pan4p_c"}, {"name": "Alpha-D-Ribose 1-phosphate", "notes": {"original_bigg_ids": ["r1p_c"]}, "charge": -2, "formula": "C5H9O8P", "compartment": "c", "id": "r1p_c"}, {"name": "3-(4-Hydroxyphenyl)pyruvate", "notes": {"original_bigg_ids": ["34hpp_c"]}, "charge": -1, "formula": "C9H7O4", "compartment": "c", "id": "34hpp_c"}, {"name": "Phenylpropanoate", "notes": {"original_bigg_ids": ["pppn_c"]}, "charge": -1, "formula": "C9H9O2", "compartment": "c", "id": "pppn_c"}, {"name": "Phenylpropanoate", "notes": {"original_bigg_ids": ["pppn_p"]}, "charge": -1, "formula": "C9H9O2", "compartment": "p", "id": "pppn_p"}, {"name": "Phosphonate", "notes": {"original_bigg_ids": ["ppt_p"]}, "charge": -2, "formula": "HO3P", "compartment": "p", "id": "ppt_p"}, {"name": "2-(Formamido)-N1-(5-phospho-D-ribosyl)acetamidine", "notes": 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"tcb_p"}, {"notes": {"original_bigg_ids": ["colipaOA_e"]}, "compartment": "e", "name": "Membrane LPS mixture", "charge": 0, "id": "colipaOA_e"}, {"name": "Salmochelin-S1", "notes": {"original_bigg_ids": ["salchs1_c"]}, "charge": 0, "formula": "C26H30N2O16", "compartment": "c", "id": "salchs1_c"}, {"name": "Salmochelin-SX", "notes": {"original_bigg_ids": ["salchsx_c"]}, "charge": -1, "formula": "C16H21NO11", "compartment": "c", "id": "salchsx_c"}, {"name": "2-Aminoethylphosphonate", "notes": {"original_bigg_ids": ["AEP_e"]}, "charge": -1, "formula": "C2H7N1O3P1", "compartment": "e", "id": "AEP_e"}, {"name": "Oxaloacetate", "notes": {"original_bigg_ids": ["oaa_p"]}, "charge": -2, "formula": "C4H2O5", "compartment": "p", "id": "oaa_p"}, {"name": "Tetrathionate", "notes": {"original_bigg_ids": ["tet_p"]}, "charge": -2, "formula": "O6S4", "compartment": "p", "id": "tet_p"}, {"name": "Pseudouridine 5  phosphate C9H11N2O9P", "notes": {"original_bigg_ids": ["psd5p_c"]}, "charge": -2, "formula": "C9H13N2O9P", "compartment": "c", "id": "psd5p_c"}, {"name": "O-antigen-x20-core-oligosaccharide-lipid-A", "notes": {"original_bigg_ids": ["colipa20Oag_e"]}, "charge": -11, "formula": "C656H1103N2O440P4", "compartment": "e", "id": "colipa20Oag_e"}, {"name": "2-Dehydro-3-deoxy-D-galactonate 6-phosphate", "notes": {"original_bigg_ids": ["2dh3dgal6p_c"]}, "charge": -3, "formula": "C6H8O9P", "compartment": "c", "id": "2dh3dgal6p_c"}, {"name": "2-3-dihydroxybenzoylserine trimer", "notes": {"original_bigg_ids": ["23dhbzs3_c"]}, "charge": 0, "formula": "C30H29N3O16", "compartment": "c", "id": "23dhbzs3_c"}, {"name": "Residual-atoms-of-reaction-DMBZIDSYN", "notes": {"original_bigg_ids": ["remnant1_e"]}, "charge": 0, "formula": "C4H2N2O3", "compartment": "e", "id": "remnant1_e"}, {"name": "D-Tagatose", "notes": {"original_bigg_ids": ["tag_DASH_D_p"]}, "charge": 0, "formula": "C6H12O6", "compartment": "p", "id": "tag__D_p"}, {"name": "N Ribosylnicotinamide C11H15N2O5", "notes": {"original_bigg_ids": ["rnam_e"]}, "charge": 1, "formula": "C11H15N2O5", "compartment": "e", "id": "rnam_e"}, {"name": "Cis-Aconitate", "notes": {"original_bigg_ids": ["acon_DASH_C_p"]}, "charge": -3, "formula": "C6H3O6", "compartment": "p", "id": "acon_C_p"}, {"name": "Ferrioxamine-G-fe", "notes": {"original_bigg_ids": ["feroxGfe_e"]}, "charge": 0, "formula": "C27H46FeN6O10", "compartment": "e", "id": "feroxGfe_e"}, {"name": "Salmochelin-S2", "notes": {"original_bigg_ids": ["salchs2_c"]}, "charge": 0, "formula": "C42H49N3O26", "compartment": "c", "id": "salchs2_c"}, {"name": "Salmochelin-S2-Fe-III", "notes": {"original_bigg_ids": ["salchs2fe_c"]}, "charge": 0, "formula": "C42FeH49N3O26", "compartment": "c", "id": "salchs2fe_c"}, {"name": "Cobalt-precorrin-2", "notes": {"original_bigg_ids": ["codscl2_c"]}, "charge": -7, "formula": "C42H39CoN4O16", "compartment": "c", "id": "codscl2_c"}, {"name": "Aminoimidazole-riboside", "notes": {"original_bigg_ids": ["airs_e"]}, "charge": 0, "formula": "C8H13N3O4", "compartment": "e", "id": "airs_e"}, {"name": "D-Glycerate 2-phosphate", "notes": {"original_bigg_ids": ["2pg_p"]}, "charge": -3, "formula": "C3H4O7P", "compartment": "p", "id": "2pg_p"}, {"name": "Undecaprenyl diphosphate galactose-rhamnose-mannose-abequose", "notes": {"original_bigg_ids": ["udcpo4_e"]}, "charge": -2, "formula": "C79H132O24P2", "compartment": "e", "id": "udcpo4_e"}, {"name": "Salmochelin-S2-Fe-III", "notes": {"original_bigg_ids": ["salchs2fe_p"]}, "charge": 0, "formula": "C42FeH49N3O26", "compartment": "p", "id": "salchs2fe_p"}, {"name": "Undecaprenyl diphosphate galactose-rhamnose-mannose-abequose-acetyl", "notes": {"original_bigg_ids": ["udcpo5_e"]}, "charge": -2, "formula": "C81H134O25P2", "compartment": "e", "id": "udcpo5_e"}, {"name": "2-Aminoethylphosphonate", "notes": {"original_bigg_ids": ["AEP_p"]}, "charge": -1, "formula": "C2H7N1O3P1", "compartment": "p", "id": "AEP_p"}, {"name": "Ferrioxamine-G", "notes": {"original_bigg_ids": ["feroxG_e"]}, "charge": 0, "formula": "C27H46N6O10", "compartment": "e", "id": "feroxG_e"}, {"name": "Formamide", "notes": {"original_bigg_ids": ["foam_p"]}, "charge": 0, "formula": "CH3NO", "compartment": "p", "id": "foam_p"}, {"name": "4-Hydroxy-benzyl alcohol", "notes": {"original_bigg_ids": ["4hba_c"]}, "charge": 0, "formula": "C7H8O2", "compartment": "c", "id": "4hba_c"}, {"notes": {"original_bigg_ids": ["diact_e"]}, "compartment": "e", "name": "Diacetyl", "charge": 0, "id": "diact_e"}, {"notes": {"original_bigg_ids": ["indpyr_c"]}, "compartment": "c", "name": "Indolepyruvate C11H8NO3", "charge": 0, "id": "indpyr_c"}, {"notes": {"original_bigg_ids": ["pprdn_c"]}, "compartment": "c", "name": "Piperideine", "charge": 0, "id": "pprdn_c"}, {"notes": {"original_bigg_ids": ["5aptn_c"]}, "compartment": "c", "name": "5-Aminopentanoate", "charge": 0, "id": "5aptn_c"}, {"notes": {"original_bigg_ids": ["cellb_e"]}, "compartment": "e", "name": "Cellobiose", "charge": 0, "id": "cellb_e"}, {"notes": {"original_bigg_ids": ["btd_DASH_RR_e"]}, "compartment": "e", "name": " R R  2 3 Butanediol C4H10O2", "charge": 0, "id": "btd_RR_e"}, {"notes": {"original_bigg_ids": ["13ppd_e"]}, "compartment": "e", "name": "1,3-Propanediol", "charge": 0, "id": "13ppd_e"}, {"notes": {"original_bigg_ids": ["rbt_e"]}, "compartment": "e", "name": "Ribitol", "charge": 0, "id": "rbt_e"}, {"notes": {"original_bigg_ids": ["glutar_c"]}, "compartment": "c", "name": "Glutarate", "charge": 0, "id": "glutar_c"}, {"notes": {"original_bigg_ids": ["oxptn_c"]}, "compartment": "c", "name": "5-Oxopentanoate", "charge": 0, "id": "oxptn_c"}, {"notes": {"original_bigg_ids": ["bz_e"]}, "compartment": "e", "name": "Benzoate", "charge": 0, "id": "bz_e"}, {"name": "3-Oxoadipyl-CoA", "notes": {"original_bigg_ids": ["oxadpcoa_c"]}, "charge": -5, "formula": "C27H37N7O20P3S", "compartment": "c", "id": "oxadpcoa_c"}, {"notes": {"original_bigg_ids": ["glutcoa_c"]}, "compartment": "c", "name": "Glutaryl-CoA", "charge": 0, "id": "glutcoa_c"}, {"notes": {"original_bigg_ids": ["abt_DASH_D_e"]}, "compartment": "e", "name": "D-Arabitol", "charge": 0, "id": "abt__D_e"}, {"name": "4-Hydroxyphenylacetate", "notes": {"original_bigg_ids": ["4hphac_p"]}, "charge": -1, "formula": "C8H7O3", "compartment": "p", "id": "4hphac_p"}, {"notes": {"original_bigg_ids": ["4hphac_c"]}, "compartment": "c", "name": "4-Hydroxyphenylacetate", "charge": 0, "id": "4hphac_c"}, {"name": "2(alpha-D-Mannosyl-6-phosphate)-D-glycerate", "notes": {"original_bigg_ids": ["man6pglyc_c"]}, "charge": -3, "formula": "C9H14O12P", "compartment": "c", "id": "man6pglyc_c"}, {"name": "D-Allose", "notes": {"original_bigg_ids": ["all_DASH_D_c"]}, "charge": 0, "formula": "C6H12O6", "compartment": "c", "id": "all__D_c"}, {"name": "Cyclic diguanosine monophosphate", "notes": {"original_bigg_ids": ["cdigmp_c"]}, "charge": 0, "formula": "C20H22N10O14P2", "compartment": "c", "id": "cdigmp_c"}, {"name": "S-Methyl-L-methionine", "notes": {"original_bigg_ids": ["mmet_c"]}, "charge": 1, "formula": "C6H14NO2S", "compartment": "c", "id": "mmet_c"}, {"name": "Acetoacetate", "notes": {"original_bigg_ids": ["acac_c"]}, "charge": -1, "formula": "C4H5O3", "compartment": "c", "id": "acac_c"}, {"name": "Fe p", "notes": {"original_bigg_ids": ["fe_e"]}, "charge": 0, "formula": "Fe", "compartment": "e", "id": "fe_e"}, {"name": "KO-KDO-LIPID A", "notes": {"original_bigg_ids": ["kokdolipidA_e"]}, "charge": 0, "formula": "C110H196N2O40P2", "compartment": "e", "id": "kokdolipidA_e"}, {"name": "D Galactosamine 6 phosphate C6H14NO8P", "notes": {"original_bigg_ids": ["galam6p_c"]}, "charge": 0, "formula": "C6H14NO8P", "compartment": "c", "id": "galam6p_c"}, {"name": "Sucrose", "notes": {"original_bigg_ids": ["sucr_c"]}, "charge": 0, "formula": "C12H22O11", "compartment": "c", "id": "sucr_c"}, {"name": "Cellobiose", "notes": {"original_bigg_ids": ["cellb_p"]}, "charge": 0, "formula": "C12H22O11", "compartment": "p", "id": "cellb_p"}, {"name": "3 Hydroxyphenylacetic acid C8H8O3", "notes": {"original_bigg_ids": ["3hoxpac_e"]}, "charge": 0, "formula": "C8H8O3", "compartment": "e", "id": "3hoxpac_e"}, {"name": "Penicillin G C16H18N2O4S", "notes": {"original_bigg_ids": ["peng_p"]}, "charge": 0, "formula": "C16H18N2O4S", "compartment": "p", "id": "peng_p"}, {"name": "Penicillin G C16H18N2O4S", "notes": {"original_bigg_ids": ["peng_e"]}, "charge": 0, "formula": "C16H18N2O4S", "compartment": "e", "id": "peng_e"}, {"name": "Raffinose C18H32O16", "notes": {"original_bigg_ids": ["raffin_e"]}, "charge": 0, "formula": "C18H32O16", "compartment": "e", "id": "raffin_e"}, {"name": "Raffinose C18H32O16", "notes": {"original_bigg_ids": ["raffin_p"]}, "charge": 0, "formula": "C18H32O16", "compartment": "p", "id": "raffin_p"}, {"name": "D Galactosamine C6H13NO5", "notes": {"original_bigg_ids": ["galam_p"]}, "charge": 0, "formula": "C6H13NO5", "compartment": "p", "id": "galam_p"}, {"name": "4 Hydroxyphenylacetic acid C8H8O3", "notes": {"original_bigg_ids": ["4hoxpac_e"]}, "charge": 0, "formula": "C8H8O3", "compartment": "e", "id": "4hoxpac_e"}, {"name": "3 Hydroxyphenylacetic acid C8H8O3", "notes": {"original_bigg_ids": ["3hoxpac_p"]}, "charge": 0, "formula": "C8H8O3", "compartment": "p", "id": "3hoxpac_p"}, {"name": "6 Aminopenicillanic acid C8H12N2O3S", "notes": {"original_bigg_ids": ["6apa_p"]}, "charge": 0, "formula": "C8H12N2O3S", "compartment": "p", "id": "6apa_p"}, {"name": "6 Aminopenicillanic acid C8H12N2O3S", "notes": {"original_bigg_ids": ["6apa_e"]}, "charge": 0, "formula": "C8H12N2O3S", "compartment": "e", "id": "6apa_e"}, {"name": "(R)-Methylmalonyl-CoA", "notes": {"original_bigg_ids": ["mmcoa_R_c"]}, "charge": 0, "formula": "C25H35N7O19P3S", "compartment": "c", "id": "mmcoa__R_c"}, {"name": "D Galactosamine C6H13NO5", "notes": {"original_bigg_ids": ["galam_e"]}, "charge": 0, "formula": "C6H13NO5", "compartment": "e", "id": "galam_e"}, {"name": "1' Phosphoethanolamin lipidIVa C70H132N3O26P3", "notes": {"original_bigg_ids": ["enlipidA_LptA_p"]}, "charge": 0, "formula": "C70H132N3O26P3", "compartment": "p", "id": "enlipidA_LptA_p"}, {"notes": {"original_bigg_ids": ["LptA_p"]}, "compartment": "p", "name": "Periplasmic lipid A binding protein ", "charge": 0, "id": "LptA_p"}, {"name": "1' Phosphoethanolamin lipidIVa C70H132N3O26P3", "notes": {"original_bigg_ids": ["enlipidA_p"]}, "charge": 0, "formula": "C70H132N3O26P3", "compartment": "p", "id": "enlipidA_p"}, {"name": "3 Nitrotyramine C8H15N2", "notes": {"original_bigg_ids": ["3ntym_e"]}, "charge": 0, "formula": "C8H15N2", "compartment": "e", "id": "3ntym_e"}, {"name": "Salicin", "notes": {"original_bigg_ids": ["salcn_e"]}, "charge": 0, "formula": "C13H18O7", "compartment": "e", "id": "salcn_e"}, {"name": "Salicin", "notes": {"original_bigg_ids": ["salcn_p"]}, "charge": 0, "formula": "C13H18O7", "compartment": "p", "id": "salcn_p"}, {"name": "1' Phosphoethanolamin lipidIVa C70H132N3O26P3", "notes": {"original_bigg_ids": ["enlipidA_e"]}, "charge": 0, "formula": "C70H132N3O26P3", "compartment": "e", "id": "enlipidA_e"}, {"name": "Phenylacetic acid", "notes": {"original_bigg_ids": ["pac_e"]}, "charge": 0, "formula": "C8H7O2", "compartment": "e", "id": "pac_e"}, {"name": "N Acetyl D galactosamine 6 phosphate C8H16NO9P", "notes": {"original_bigg_ids": ["acgal6p_c"]}, "charge": 0, "formula": "C8H16NO9P", "compartment": "c", "id": "acgal6p_c"}, {"name": "2 3 2'3' Tetrakis beta hydroxymyristoyl  D glucosaminyl 1 6 beta D glucosamine 1 4' bisphosphate C68H126N2O23P2", "notes": {"original_bigg_ids": ["lipidA_core_e_p"]}, "charge": 0, "formula": "C68H126N2O23P2", "compartment": "p", "id": "lipidA_core_e_p"}, {"name": "Phenylacetic acid", "notes": {"original_bigg_ids": ["pac_p"]}, "charge": 0, "formula": "C8H7O2", "compartment": "p", "id": "pac_p"}, {"name": " O6 antigen x4 core oligosaccharide lipid A O225H390N2O120P2", "notes": {"original_bigg_ids": ["o6a4colipa_e"]}, "charge": 0, "formula": "O225H390N2O120P2", "compartment": "e", "id": "o6a4colipa_e"}, {"name": "D Arabinose C5H10O5", "notes": {"original_bigg_ids": ["arab_DASH_D_p"]}, "charge": 0, "formula": "C5H10O5", "compartment": "p", "id": "arab__D_p"}, {"name": "D Arabinose C5H10O5", "notes": {"original_bigg_ids": ["arab_DASH_D_c"]}, "charge": 0, "formula": "C5H10O5", "compartment": "c", "id": "arab__D_c"}, {"name": "D-Ribulose", "notes": {"original_bigg_ids": ["rbl_DASH_D_c"]}, "charge": 0, "formula": "C5H10O5", "compartment": "c", "id": "rbl__D_c"}, {"name": "D Arabinose C5H10O5", "notes": {"original_bigg_ids": ["arab_DASH_D_e"]}, "charge": 0, "formula": "C5H10O5", "compartment": "e", "id": "arab__D_e"}, {"notes": {"original_bigg_ids": ["udpacgal_c"]}, "compartment": "c", "name": "UDP-N-acetyl-D-galactosamine", "charge": 0, "id": "udpacgal_c"}, {"notes": {"original_bigg_ids": ["dkfp_c"]}, "compartment": "c", "name": "6-deoxy-5-ketofructose 1-phosphate", "charge": 0, "id": "dkfp_c"}, {"name": "(3S)-3-Hydroxyadipyl-CoA", "notes": 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{"original_bigg_ids": ["srb1p_c"]}, "compartment": "c", "name": "Sorbose 1-phosphate", "charge": 0, "id": "srb1p_c"}, {"notes": {"original_bigg_ids": ["raffin_c"]}, "compartment": "c", "name": "Raffinose C18H32O16", "charge": 0, "id": "raffin_c"}], "version": 1, "id": "iZ_1308"}